Gemmata sp. SH-PL17: VT84_20050
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Entry
VT84_20050 CDS
T04358
Symbol
carC
Name
(GenBank) All-trans-zeta-carotene desaturase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00906
Carotenoid biosynthesis
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
Module
ges_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
VT84_20050 (carC)
Enzymes [BR:
ges01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
VT84_20050 (carC)
1.3.99.28 phytoene desaturase (neurosporene-forming)
VT84_20050 (carC)
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
VT84_20050 (carC)
1.3.99.31 phytoene desaturase (lycopene-forming)
VT84_20050 (carC)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_3
HI0933_like
Pyr_redox
FAD_binding_2
Thi4
Glu_dehyd_C
ApbA
GIDA
NAD_binding_9
GDI
AlaDh_PNT_C
3HCDH_N
GMC_oxred_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AMV26703
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Position
4687497..4689098
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AA seq
533 aa
AA seq
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MISTASDTAPARTHHSPRARKPNSVLIIGAGPGGLAAALLLAKAGLDVHVVERKSHVGGR
CSAIEEQGFRFDLGPTFFLYPRVLDRIFKLIGRDLRTEIPMVRLDPQYRIAFGGGGELNC
TPNLEQLETEVARLSPGDAQNVRRFLADNRVKMEQFRPCLERPFSGWRDLIRWQLIKLFP
TLRPWASLDEELGRYFSDERIRLAFSFQSKYLGMSPFNCPSLFSILSFLEYEYGVWHPMG
GCAAVSDGMARVAREMGVRITTNEDVKEVLFDGRKAVGVRTQSGEHRADALIINADFAHA
MTKLVPNHLRRKWTDAKIEKKKFSCSTFMMYLGVEGRFDDLPHHTIHTAADYVQNLADIE
QRHVLSDDPSFYVQNATPTDPSLAPPGMSTLYVLAPVTHQHPNVDWAKETPAFRAKLLKQ
LEKVGLVGVEKRIRFEKIVTPADWEHTYNVYRGATFSLAHSWGQMLHLRPRNRFDELESV
YLVGGGTHPGSGLPVIYESARITSRLLLEDFAHDTEWLGAPGAAELPAPVAHW
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgacggcttccgatacggccccggcccgcacacaccattcgccccgcgcccgc
aaacccaactccgttctcatcatcggcgcggggccgggcggcttggccgcagcactcctg
ctggcaaaagccggactcgacgttcacgtcgtggagcgcaagtcgcacgttggcgggcgg
tgttccgcgatcgaagaacaaggctttcggttcgacctcggccccacgttcttcctctac
ccccgcgttctggatcgcatcttcaaactgatcgggcgcgacctgcgaaccgaaatcccg
atggtccggctcgacccgcaataccgtatcgcgttcggcggcggcggcgagttgaactgc
acgccgaacctggaacagctcgaaaccgaagtcgcgcgcctcagccccggcgacgcgcag
aacgtccgccggttcctggccgacaaccgcgtgaagatggagcagttccggccgtgcctg
gagcgccccttctcgggctggcgcgacctgatccggtggcaactcatcaagctgttcccg
acgctgcgcccgtgggcctcgctcgatgaggaactgggccggtacttcagcgacgagcgc
atccggctcgcgttctcgttccagtccaagtacctgggcatgtcgccgttcaactgcccg
agtctgttctcgatcctctcgttcctcgaatacgagtacggcgtgtggcacccgatgggc
gggtgcgccgcggtgtccgacgggatggcccgcgtcgcgcgcgaaatgggcgtgcgtatc
accacgaacgaagatgtgaaagaggtgctgttcgacggccgaaaggccgttggcgtgcgc
acgcagagcggcgagcaccgagcggacgctctcatcatcaacgcggacttcgcccacgcg
atgacgaagctcgtgccgaaccacctgcgccggaagtggaccgacgcgaagatcgagaag
aagaagttctcgtgctcgacgttcatgatgtacctcggtgttgaggggcgtttcgacgac
ctcccgcaccacacaattcataccgccgcggactacgtgcagaaccttgcggacatcgag
cagcggcacgtcctgtccgacgatccgtccttctacgtgcagaacgcgacgcccaccgac
ccgagcctcgcgccccccggcatgagtacgctctacgtgctcgcgccggtcacgcaccag
cacccgaacgtcgattgggcgaaggaaacgcccgcgttccgcgcgaagctgctgaagcag
ttggagaaggtcgggctggtgggtgtggagaagcgcatccgcttcgagaagatcgtcacg
ccagcggactgggagcacacgtacaacgtgtaccgcggcgccacgttcagcctcgcgcac
tcgtgggggcagatgctccacctgcgcccgcggaaccggttcgacgaactcgaaagcgtg
tacctcgtgggcggcggaacgcaccccggcagcgggctcccggtgatctacgaatccgcc
cgcatcacgagtcgcttgctgctcgaagacttcgcccacgacacggaatggctcggcgcg
ccgggggccgcagagttacccgcgccggtcgcgcattggtga
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