Gemmata sp. SH-PL17: VT84_20280
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Entry
VT84_20280 CDS
T04358
Symbol
shc_2
Name
(GenBank) Squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00909
Sesquiterpenoid and triterpenoid biosynthesis
ges01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
VT84_20280 (shc_2)
Enzymes [BR:
ges01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
VT84_20280 (shc_2)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
VT84_20280 (shc_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Mago-bind
Motif
Other DBs
NCBI-ProteinID:
AMV26749
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Position
4750093..4751922
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AA seq
609 aa
AA seq
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MIPADRLRAAYLAARDALLAERVPGGHWVGELSTSALSTATAVMALHLANPFEHRARIDA
GLKWLADHQNADGGWGDTVKSFSNISTTMLCRAAFKLAGAKEEGETIRRVEDYLTLKAGA
LPTRRAAAIRHRYGKDHTFSVPILMTCALAGLVSWDEVPRLPFEAAYLPQSWYRFAKMPV
VSYALPALIAIGQCIHHHRRSHNPIRNAVRRFVRNRTLNVLRRIQPKTGGYLEATPLTSF
VVMALSSMRRKRTAAEAQVIDEGVRFIVNSVRPDGSWPIDTNLATWVTTLSINALVAVGD
TPSIPAPPKWEGGSLWDWLMGQQYRERHPYTGADPGGWAWTDLPGGVPDCDDTPGAILAL
YHMGYSHYPTESVGWVIGLQNSDGGWPTFCRGWGTLPFDRSGADLTAHALRALAVWSKRF
EHDHHCWLGKPESKYQFLIGYLGLTWKKYHATVSRGLAYLAKQQRPDGSWLPLWFGNQHA
PDDINPVYGTARVLAAYRDLKLKDSPECRRGVEFLLSVQNADGGWGGAKDCPSSVEETAL
AVEMLLDLAPGDAVQRGVAWLVEAVESDRFRDASPIGFYFAKLWYFEKLYPIIFTVAALG
RACRGERPV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgcagaccgcctccgcgccgcatatctcgccgcacgcgacgcactcctcgcg
gagcgggtgccgggaggtcactgggtcggcgaactttcgacgtccgccctctcgaccgcg
accgccgtcatggcgctccacctggcgaacccgttcgagcaccgcgcgcggatcgacgcg
ggcctgaagtggctcgcggaccaccaaaacgcggacggcgggtggggcgacacggtcaag
agtttctcgaacatctcgacgacgatgctgtgccgggccgcgttcaagttggccggggca
aaagaagagggagaaacgatccggcgcgtcgaagactacctcacgctgaaagcgggcgct
ctacccacgcgccgggcggctgcgatccggcaccggtacggtaaggaccacacgttctcc
gtaccgatcctgatgacgtgcgcgctggcggggctggtttcctgggacgaagtgccccgg
ctgccgtttgaagcggcgtacctcccgcaaagctggtaccggttcgcgaagatgccggtg
gtgagttacgcccttcccgcgctcatcgccatcggtcagtgcatccaccaccaccggcgc
tcgcacaacccgatccgcaacgccgtgcgccggttcgtccggaaccgcaccctgaatgtc
ctgcggcgcattcagccaaagaccggcgggtatttggaagccacaccactgacgagcttc
gtcgtgatggcactctcttccatgcgtcgcaaacgtactgctgcagaagcccaagtcatt
gatgaaggcgtgcggttcatcgtgaactcggtccgccccgacggaagctggccgatcgat
acgaacctcgcgacatgggtgacgacactctccatcaacgcactcgttgcagttggcgat
acaccgtcgataccggctcctccgaagtgggaaggcggctcactctgggactggctgatg
ggccagcaataccgagagaggcacccgtataccggagcagaccccggaggttgggcgtgg
accgatcttcccggcggagtacccgactgcgacgatacgcccggagcaattctggcgctc
taccacatgggttacagccactaccccacagagagcgtcggctgggtcattggattacaa
aactccgatggtggatggccgacgttttgtcgggggtggggtacgctcccgttcgaccgc
agcggcgcggatttaacagcacatgcccttcgcgcgctcgcagtttggtccaagcgcttt
gaacacgaccaccactgctggctcggcaagccagagagcaagtatcaattccttattggc
tacctaggtttgacctggaaaaagtaccacgcaactgtctcccgcggcctcgcatacctc
gctaagcaacagcgccccgacggatcgtggctccccctctggttcgggaaccagcacgcg
ccggacgacatcaaccctgtctacggcaccgcgcgcgtgctcgccgcgtatcgcgacttg
aaactaaaagattcgccggagtgccggcgcggggtcgagttcctgctgtccgtgcagaac
gcggatgggggatggggtggagcgaaggattgcccgtcgagtgtggaggaaacggcgctc
gcagtagaaatgctgctcgacctggcgcccggagacgccgttcagcgcggggtcgcgtgg
ctggtagaagcggtcgaatcggaccggttccgcgacgccagcccgatcgggttctacttc
gcaaagttgtggtacttcgagaagctgtacccgatcatcttcaccgtcgcagcattggga
cgggcatgccggggcgaacggccagtgtaa
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