Gemmata sp. SH-PL17: VT84_35455
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Entry
VT84_35455 CDS
T04358
Symbol
mdtC_5
Name
(GenBank) Multidrug resistance protein MdtC
KO
K18138
multidrug efflux pump
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges01501
beta-Lactam resistance
ges01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VT84_35455 (mdtC_5)
01503 Cationic antimicrobial peptide (CAMP) resistance
VT84_35455 (mdtC_5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ges02000
]
VT84_35455 (mdtC_5)
01504 Antimicrobial resistance genes [BR:
ges01504
]
VT84_35455 (mdtC_5)
Transporters [BR:
ges02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VT84_35455 (mdtC_5)
Antimicrobial resistance genes [BR:
ges01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VT84_35455 (mdtC_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
AMV29744
UniProt:
A0A142XSE0
LinkDB
All DBs
Position
8252228..8255545
Genome browser
AA seq
1105 aa
AA seq
DB search
MTIWDICIRRPVFTTMLVLGPVVLGLASYTRLGVELFPNVDVPVVVVTTTLRGAGVEEME
SSVTRQVEEAVNTVSGIDELRSTTREGVSSVVIGFKLERNGDIAAQDVRDKVSTLLPRLP
FGTDPPVVEKFNLDAAPVVTVVVSGGSGRKLREVTEIAKKQIKEDLEAVTGVGAVVLVGG
EQRAVNVVLKPDRLRAHKLSAEDVRKALAAQNLELPGGKVDSGLTEFGLRTVGRIQKPAD
FEDVIIETRTGVDGLKYSIRVKDVATVTDSVEEPRGKSRLDGNVAVSLIIQKQSGGNTVA
VADAVKARLAKIQPTLPADIKTEIIRDQSKFIKGSIEEVKFHLVLAAFLVVGTIFIFLRD
WRATLIAATAVPTSIVGTFAFMDVMGFSLNNMTLLGLILAVGIVIDDAVVVLENVFRHME
EEGSSGWEAASLATKEISLAVIATTLSLVVIFAPIAFMSGQVGRFFNSFGFVVAFAILMS
MAVSFTLTPMLCAWVLKPLKNPSPTPPPRGEGLENDKASHSPPSFSGKGAGGLGSEHPHS
SGLLTRAYVGILAWSLRHRWVVVLATIVTFLSTPVLFMIVGTDFVPKDDQSEFEVSIILK
EGTTLKSAETQLAEVESRLKTVRGVTNVFTVIGPTDGRAPKGQGDVTQVNIYCRMTDLRE
REFGQRDAMADARVLMADYPDLRTSVQDVKLISSSAFKNAQLDLSIRGPDGAKLDEFAAQ
IMKKMKTNPKFTDVDTNAAGRNPELQVRIDRQRAADQRVNVQGVATALGLLVGGEPVTKY
KEGADQYDVWLRAALPSRDRSTAIDALMVPDTKGELIELRTFAKLADEKGPATIERYNRQ
RQIGVQCNFAPGVALGDALPEVQAYVQELDMPPEYRYEFLGEAKLMADSNSNFLLAFMLA
FVFMYMILAAQFESVIHPITILMAVPLTLPFALISLMLLRTPLDVYAMIGLFMLFGIVKK
NGILQVDYTNVLIAKGLPRNEAILKANEARFRPILMTTVMLVAAMIPIATGSGPGAGARA
SMAKVILGGQLLSLLLSLLVTPVAYSIWDDMLARGKRIAAWLGRRRAAPVLLPEPEAEMD
ATAKETVRELPVFRDKEPDATPTGS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctgggacatctgcatccgccggccggtgttcaccaccatgctcgttctcggg
ccggtggtgctcggtctggcgtcgtacacccggctcggcgtcgaactgttcccgaacgtg
gacgtgcccgtggtcgtggtgacgaccacgctgcgcggcgcgggcgtcgaggaaatggaa
tcgagtgtgacgcgccaggtcgaggaagcggtgaacaccgtttccggtatcgacgaactg
cgcagcaccacgcgcgagggcgtgtccagcgtcgtgatcgggttcaaactggagcggaac
ggcgacatcgccgcacaggatgtgcgcgacaaggtgtcgacgctcttgccccggttgccc
ttcggcaccgacccgcccgtggtcgagaagttcaacctcgacgcggccccggtggtcaca
gtggtggtctccggtgggtccgggcgcaaactgcgcgaggtcactgagatcgccaagaag
cagatcaaagaagacctggaagcggtgaccggcgtcggcgcggtggtgctcgtgggcggc
gagcagcgcgcggtgaacgtcgtgctcaaaccggaccggctccgcgcccacaagctctcg
gccgaagacgtgcggaaggcgctcgcggcgcagaacctggaactgcccggaggtaaggtc
gacagtggcctgaccgagttcgggctgcgcaccgtcgggcgcatccagaagcccgcggac
tttgaagacgtcatcatcgaaacgcgcaccggagtcgacgggctgaaatactcgatccgc
gtgaaggacgtggccacggtcaccgacagcgtggaggagccgcgcgggaagtcgcggttg
gacggcaacgtcgcggtcagcctcatcattcagaaacagtccggcgggaacacggtggcc
gtggccgacgcggtcaaggcgcgactcgcgaagatccaaccgacgctcccggccgacatc
aaaaccgagatcatccgcgaccagtcgaagttcattaaggggtcgatcgaggaggtgaaa
ttccacctcgtgctcgcggcgttcctcgtggtcggcaccatcttcatcttcctgcgcgac
tggcgcgcgacgctcatcgccgcgaccgcggtgccgaccagcatcgtcggcacgttcgcg
ttcatggacgtgatgggcttcagcctcaacaacatgaccctcctgggcctcatcctcgcg
gtcgggatcgtgatcgacgacgcggtggtggtgctggagaacgtgttccggcacatggaa
gaagagggatcgagcggctgggaggccgcgagcctggctaccaaagaaatctcgctcgct
gtgatcgcgacgacgctctcgctggtagtgatcttcgccccgatcgcgttcatgtccggg
caggttgggcggttcttcaacagtttcgggttcgtggtcgcgttcgcgatcctgatgagc
atggccgtcagcttcactctcacgccgatgctctgcgcgtgggtactgaagcctttaaag
aacccctccccaacccctcccccaaggggagaggggctagaaaacgacaaggcttctcat
tctcccccttccttttcagggaagggggccggggggttaggttctgagcacccccactcg
tccgggttgctcacgcgggcttatgtgggcatcctcgcatggtcgctgcgacaccggtgg
gtggtcgtgctcgccacgatcgtcacgttcctcagcaccccggtattgttcatgatcgtg
ggcacggacttcgtcccgaaggacgaccagagcgagttcgaggtctccatcattctgaag
gaaggaacgaccctcaaatcggccgaaacgcagctcgccgaggtcgagtcccggctgaag
accgtgcgcggggtgacgaacgtattcaccgtgatcggcccgaccgacggccgcgccccg
aagggtcagggcgacgtgactcaggtgaacatctactgccgcatgaccgacctgcgcgag
cgcgagttcggccagcgcgacgcgatggccgacgcccgcgtgctgatggcagactacccg
gacctgcgcacgtcggttcaggacgtgaagctcatcagttccagtgcgttcaagaatgcg
caactcgacctgagcatccgcggtccggacggcgcgaaactcgacgaattcgcggcgcag
atcatgaagaagatgaaaacgaacccgaagttcacggacgtggacacgaacgccgcgggt
cgtaaccccgagctccaggtgcgaatcgaccgccagcgcgccgccgaccagcgcgtgaac
gtgcagggcgtcgcaaccgcgctggggctgctggtcggtggtgagccggtgacgaagtac
aaggagggtgcggaccagtacgacgtgtggctccgcgccgcactgccgagccgcgaccgg
tccacggcgatcgacgccctcatggtacccgacacgaagggcgaactgatcgaactgcgc
acgttcgcgaagctggccgacgagaaaggcccggcgaccatcgagcgctacaaccggcag
cgccagatcggggtgcagtgcaacttcgcgccgggcgtggccctcggcgacgcgctcccg
gaggtgcaggcctacgtgcaggaactcgacatgccgcccgagtaccggtacgagttcctc
ggcgaagcgaagctcatggccgactcgaactcgaacttcctgctcgcgttcatgctcgcg
ttcgtcttcatgtacatgatcctcgcggcgcagttcgagagcgtcatccaccccatcacg
atccttatggcggtaccgctcacgctgccgttcgcgctgatctcgctcatgctgctccgc
acgccgctcgacgtgtacgcgatgatcgggctgttcatgctgttcggcatcgtgaagaag
aacgggatcttgcaggtggactacacgaacgtgctgatcgcgaaggggctgccccgcaac
gaggccattctcaaagcaaacgaggcccggttccggccgatcctgatgacgacggtgatg
ctcgtggccgcgatgatcccgatcgcgaccgggagcggtcccggtgcgggcgcgcgggcg
agcatggcgaaggtcatcctcggcggccagttgctctcgctgttgctctcgctgctagtc
acgccggtcgcgtactcgatctgggacgacatgctcgctcgcgggaaacgcatcgcggcg
tggctgggccggcgccgggcagccccggtactgctcccggaaccggaggcggaaatggac
gccaccgcgaaggaaacggtgcgcgagttgccggtcttccgcgacaaggaaccggacgcg
accccgaccggctcgtaa
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