Geobacter sp. SVR: GSVR_11110
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Entry
GSVR_11110 CDS
T10318
Symbol
shc-2
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
gev Geobacter sp. SVR
Pathway
gev00909
Sesquiterpenoid and triterpenoid biosynthesis
gev01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
GSVR_11110 (shc-2)
Enzymes [BR:
gev01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
GSVR_11110 (shc-2)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
GSVR_11110 (shc-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
DUF3716
HTH_91
Motif
Other DBs
NCBI-ProteinID:
BCS52803
LinkDB
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Position
complement(1206889..1209021)
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AA seq
710 aa
AA seq
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MFSVIRGGKNHTSDTSGGGPDDARRESVTKSAALLLASRQKEDGHWVFDLEADATIPAEY
VMLQRFIGRDLDSETASRLSAYLLERQLPDGGWPLYAVDGDANISASVKAYFALKLLGHD
KHAPHMVKARQMILALGGAATCNVFTRITLALFGQVPWHTPPAMPIEIVLLPKWFFFHLS
KIAYWSRTVIVPLLILYTKKPVCRLNHSEGIAELFTTPPDMLGHLDRFKHRIWRKNAFIV
LDRFLKRTMHLMPAPVRRRALGEAEHWTRARMKGDGGIGAIYPAMANAVMALKTLGCSDT
DPDYLRGIEAIDNLMIHRNPAVVSLPANDADAPFAGFDASSAAPELYPAAHLQTAGNLEF
SFCQPCNSPVWDTCLSLSALAEAGHAGDACSAEAAIEWLFSQQITTPGDWSRKCPGLECG
GWAFQYENALYPDVDDTSKVLMSLFRAGALERPEYGEKIARAVRWVLGMQSADGGWGAFD
VDNNHLYLNDIPFADHGALLDPSTADLTGRCIEMLGMLGHGPDYPPIARGIAYLKKEQEE
FGGWFGRWGVNYIYGTWSVLSGLHQAGEDMGSPYVRKAVDWLLSCQNSDGGWGETCASYD
NPSLAGSGASTASQTAWALLALMAAGEAGHSAVQSGIGYLVQTYDNGWDEQHFTGTGFPR
VFYLRYHGYSLFFPVWALGAYARQQHRGETVQNRVREQNTAKLRSMAEGA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgtcatacgtggcggcaaaaaccatacaagcgacacctcgggcggcggcccc
gacgatgcccgccgggaaagcgtcacaaagagcgcggcactgctgcttgcctcacggcaa
aaggaggatgggcactgggtgttcgatctggaagcggatgcgaccataccggcggaatat
gtgatgctgcagcgcttcatcggccgggacctggattccgaaactgcttcacggctgtcc
gcctacctgctggaacggcagttgccggacggcggctggccgctgtatgccgttgacggc
gatgccaacatcagcgccagcgtaaaggcatatttcgccctcaaactgctcggacacgac
aagcatgccccccacatggtgaaggcacgccagatgatcctggccttgggaggggctgca
acctgcaatgtcttcaccaggatcaccctggcgctcttcggccaggttccctggcacacg
ccgcccgccatgccgatcgagatcgtattgctgccgaaatggttcttcttccatttgagc
aaaatcgcctactggtcccggacggtgatcgtgccgttactgatcctgtacaccaagaag
ccggtctgccggctgaaccacagcgagggtatcgcggaactgttcactacgccgccggat
atgctcggccatctggacagattcaagcaccggatctggcgcaagaacgccttcatcgtg
ctggacaggtttctcaaacgcaccatgcatctgatgcccgcacctgtccgaaggcgcgcc
ctgggtgaagcggagcactggacccgggccaggatgaagggggatggcggcatcggtgcc
atttatcccgccatggccaatgccgtcatggcgctgaaaaccctggggtgcagcgatacg
gacccggattatctgcgcggtattgaagccatcgacaacctgatgatccacagaaacccc
gctgttgtcagtctgcccgcaaatgatgccgacgctccctttgccggcttcgatgcatcg
tccgcagcgcccgagctgtatcccgccgcgcacctgcagacagcggggaatctggagttc
agcttctgccaaccatgcaattctccggtctgggatacgtgtctgagcctttcggcactg
gccgaagcgggccatgccggcgatgcctgttcagcggaagcagccattgagtggctgttc
agccagcaaatcaccacgccgggcgactggtcccgcaaatgtcccggattggagtgcgga
ggttgggccttccagtatgagaacgccctgtatcccgatgtggacgacacctccaaggtg
ctgatgagcctgttccgggccggagcgctggaacggccggaatacggggagaagattgcc
agggcggtgcgatgggtgctgggcatgcagagtgcggacggcggatggggcgcctttgat
gtggataacaaccatctctatctcaacgacataccgtttgccgatcacggcgcgctgctc
gatccgagcacggccgacctgaccggcaggtgcatcgagatgttgggaatgctggggcat
ggccccgattatccgccgatagcccggggcatcgcttacctgaagaaggagcaggaggag
tttggcggctggttcgggcgctggggagtgaactatatctacggtacctggtcggtgctg
tccgggctgcatcaggccggggaggacatgggcagcccctatgtcaggaaagccgtggac
tggctgctctcatgccaaaacagcgacggcggatggggcgagacctgcgccagttacgac
aatccctcgcttgcgggaagcggcgccagcaccgcctcgcagaccgcctgggccttgttg
gcgctcatggcggccggcgaagccggtcactccgcggtgcaatcagggatcggataccta
gttcagacctatgacaatggctgggatgagcagcatttcaccggaaccggattcccgcgg
gtgttctatctgcggtaccacgggtatagcctgtttttcccggtctgggctttgggagcc
tacgcacggcaacagcatcggggcgagacggttcagaaccgggtccgcgagcagaacacc
gccaagttgcggagtatggccgaaggtgcgtaa
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