Geobacter sp. SVR: GSVR_13460
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Entry
GSVR_13460 CDS
T10318
Symbol
nth_2
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gev Geobacter sp. SVR
Pathway
gev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSVR_13460 (nth_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_13460 (nth_2)
Enzymes [BR:
gev01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GSVR_13460 (nth_2)
DNA repair and recombination proteins [BR:
gev03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSVR_13460 (nth_2)
Prokaryotic type
GSVR_13460 (nth_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF6538
Motif
Other DBs
NCBI-ProteinID:
BCS53038
LinkDB
All DBs
Position
1474068..1474736
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AA seq
222 aa
AA seq
DB search
MIAVMKPDDIHAVIAILREQCRDWRTPAVTVVADGGRDPFKVLVSCIISLRTRDEVTAVA
SARLFSRAATPELMQHLSVDEVAELVYPAGFYRNKASQILEISRRLVADYGGNVPDDMDT
LLQFKGVGRKTANLVQTLGFGKPGICVDTHVHRICNRWGYVETKSPDETERHLRMLLPVD
YWIEINDLLVAFGQNQCYPISPRCSTCRIASFCARRGVLKSR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgtcatgaaaccagatgacattcacgcggttattgctattttgcgggaacag
tgccgggattggcggacaccggcagtcaccgttgtggccgacggcggccgggacccattc
aaggttctggtctcctgcatcatttcactgcgcaccagggacgaggtcactgccgttgcg
tcggccaggcttttctcccgtgccgcaacccccgagctgatgcagcacttgtcggtggat
gaggtcgctgagctcgtgtaccctgccggattctaccggaacaaagcgtcgcagatactg
gaaatttctcgccggttggtggccgattacggcggaaatgtgccggacgacatggacacc
ctgctgcaattcaaaggcgtcgggcgcaagaccgcaaatctcgtgcagacgctgggattc
ggaaagccgggaatctgtgtcgatacccatgtccaccgcatttgcaaccgatggggatat
gtcgaaacaaagtcgccggatgaaaccgagcgccatttgcgcatgctgctgcccgtggac
tactggatcgagatcaacgatctcctggtggcttttgggcagaaccaatgttatccgatc
tcaccacgctgttccacctgccggattgcgagcttctgtgcccgcagaggcgtcctgaaa
tcacgctga
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