Geothrix oryzae: GETHOR_11930
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Entry
GETHOR_11930 CDS
T09137
Symbol
acrB
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gex
Geothrix oryzae
Pathway
gex01501
beta-Lactam resistance
gex01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GETHOR_11930 (acrB)
01503 Cationic antimicrobial peptide (CAMP) resistance
GETHOR_11930 (acrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gex02000
]
GETHOR_11930 (acrB)
01504 Antimicrobial resistance genes [BR:
gex01504
]
GETHOR_11930 (acrB)
Transporters [BR:
gex02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GETHOR_11930 (acrB)
Antimicrobial resistance genes [BR:
gex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GETHOR_11930 (acrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
BDU69092
LinkDB
All DBs
Position
complement(1343547..1346717)
Genome browser
AA seq
1056 aa
AA seq
DB search
MVNFFIDRPIFAWVVAIVMMLAGLLAINTLPISQYPPVAPPSISVDAFYPGASAKTVENT
VTQIIEQKMTGLDRLLYMSASSDSAGHGSVTLTFQPGTDPDAAWAKVQNKLELAKPLMPQ
VVQQMGIAVTKSTKNIFMILSISSADGSMNAEDLRDYLASNVENVISRVEGVGEVLSFGT
QYAMRIWLNPDKMVGYRITPDDIRQAVKAYNAQISAGQAGGLPAVQGQRLNVTVNVQELL
QTPEQFGAIPLRINADGSTIRLRDVARTELGTESYESDTKLNGQPAAGMLIRLASGANAL
DTSKLVKAKLNELSPYFPPGVKVDYPYETTPFVTVAINEVVKTLIEAVVLVFLVMLLFLG
NFRATLIPTIAVPVVLLGTFAILQYVGMSINMLTMFAMVLAIGLLVDDAIVVVENVERIM
HEEGLSPLEATRKSMGQITSALVGIGLVLSAVFGPMAFFGGSTGIIFRQFSFTLITAMML
SVVVALVLTPSLCVTFLKPIEKGHEAAEKGWKVTRPFFLWFDHFYNKINHIFVGQLERVL
SKWGRYAVIYGVIVLGMGVLFMRLPTAFLPEEDQGIIMTLVQLPAGSTLEQTQKVMSEVQ
QYYQNDEKEAVASCLTVGGFSVAGRGQNNGMAFVKLKDWHLRDRSDLKAEAVIRRAMRTF
SARRDSMVFAVAPPAILELGNATGFDFQLQDRGGVGHAKLMEARNQLLGLAAQNANLKAV
RPNGLDDQPEYNVRLNQDRAGTLGVPLPAISDTLASAWGGSYVNDFINRGRVKRVYMQAD
APFRMQLEDLNKLYVRSTAGAMVPFSAFSAGEWSYGSPNLQRYNSFPSVNIQGEPAAGKS
TGDAMLAMEDIVKKLPAGIGFEWTGLSYQERQAGSQAPALYAVSILVIFLCLAALYESWT
IPFSILLVLPVGVFGAVLATWGRGLSSDVYFQIGLLTTLGLTAKNAILIVQFAEEQMAQG
MGLLEAAMEASRLRLRPILMTSLAFTFGVLPMALTRGAGAAAQNAIGTGVVGGMLTATFI
AIFYIPLSFVLVSQLFRKKRQEPVPASVGNSEEGQP
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatttcttcatcgatcgacccatcttcgcctgggtggtggccatcgtcatgatg
ctggccggcctcctggccatcaacaccctgcccatctcccagtacccgcccgtcgccccg
ccctccatctccgtggacgccttctatcccggggcctccgccaagaccgtggagaacacc
gtcacccagatcatcgagcagaagatgacgggcctggaccggctgctctacatgtccgcc
agcagcgactccgccggccacggtagcgtcacgctcaccttccagccgggcaccgatccc
gacgccgcctgggccaaggtccagaacaagctggagctggccaagcccctgatgccccag
gtcgtgcagcagatgggcatcgcggtcaccaagtccacgaagaacatcttcatgatcctg
tccatctcctcggcggacggcagcatgaatgccgaggacctgcgcgactacctggcctcg
aatgtggagaatgtcatcagccgtgtggagggcgtcggcgaggtcctctccttcggcacc
cagtacgccatgcggatctggctcaaccccgacaagatggtggggtaccgcatcacaccc
gacgacatccgccaggccgtgaaggcctacaacgcgcagatctccgccggccaggcgggc
ggcctccccgccgtccagggccagcggttgaatgtgaccgtgaatgtgcaggaactcctc
cagacgcccgagcagttcggggccatccccctccgcatcaacgcggatggctccacgatc
cgcctccgggatgtggcccgcaccgagctcggaaccgagtcctacgaaagcgacacgaag
ctcaacgggcagccggccgccggcatgctcatccgcctggcctcgggcgccaacgcgttg
gacacctccaagctcgtcaaggccaagctcaacgagctctccccctatttccccccgggg
gtcaaggtcgactacccctacgagacgacccccttcgtaaccgtggccatcaacgaggtg
gtgaagaccctcatcgaggccgtggtcctcgtcttcctggtcatgctgctcttcctcggg
aacttccgcgccaccttgatcccgaccatcgcggtcccggtggtgctcctgggcaccttc
gcgatcctccaatatgtgggcatgtccatcaacatgctcaccatgttcgccatggtgctg
gccatcggcctcctggtggacgatgccatcgtcgtggtcgagaatgtcgagcgcatcatg
cacgaggagggcctgtcacccctcgaggccacccggaaatccatgggccagatcaccagc
gcccttgtgggcatcggcctggtgctgtccgccgtgttcggccccatggccttcttcggc
gggtccacgggcatcatcttccggcagttctccttcaccctcatcaccgccatgatgctg
tccgtggtggtggccctggtcctcacgccctccctctgcgtgaccttcctgaagcccatc
gagaagggccacgaggccgccgagaagggctggaaagtcacgcgtcccttcttcctgtgg
ttcgaccacttctacaacaagatcaaccacatcttcgtgggccagctcgagcgcgtgctc
tccaagtggggtcgctacgccgtcatctacggcgtgatcgtgctcggcatgggcgtcctg
ttcatgcgcctgcccaccgccttcctccccgaggaggaccagggcatcatcatgaccctc
gtgcagctccccgccggatccaccctggagcagacccagaaggtcatgtccgaggtccag
cagtactaccagaacgatgagaaggaggccgtcgcctcctgcctgaccgtgggcggattc
agcgtggccggccgtggccagaacaacggcatggccttcgtcaagctcaaggactggcac
ctccgggaccgctccgacctgaaggcggaggccgtcatcaggcgagccatgcgcaccttc
tccgcccgccgggattccatggtcttcgccgtggcgccccccgccatcctggaactcggc
aacgcgacgggcttcgacttccagctgcaggatcgcggcggcgtcggccatgccaagctc
atggaggcccggaatcagctgctgggtctggcagcccagaatgccaacctcaaggccgtg
cgtcccaacggcctggatgaccagccggaatacaatgtccggctcaaccaggaccgggcg
ggtacgctgggcgtccccctgccggccatcagcgacaccctggccagcgcctggggcggc
tcctatgtgaacgacttcatcaaccgcggccgggtcaagcgggtctacatgcaggccgat
gcgcccttccgcatgcagctggaggacctgaacaagctctatgtcaggagcaccgccggg
gcgatggtgcccttctccgccttctccgccggcgaatggagctatgggtctcccaacctc
cagcgctacaacagcttcccttccgtgaacatccagggtgaacccgctgccggcaagagc
accggcgacgccatgctggccatggaggacatcgtcaagaagctcccggccggcatcggc
ttcgagtggacgggactctcctaccaggaacggcaggcgggctcccaggccccggcgctc
tacgccgtgtccatcctggtgatcttcctgtgcctcgccgccctctacgagagctggacg
atccccttctcgatcctcctcgtgcttcccgtgggcgtcttcggcgccgtgctggccacc
tggggccggggcctgtccagtgatgtctacttccagatcggcctgctgacgaccctcggc
ctcaccgccaagaacgccatcctcatcgtgcagttcgccgaggaacagatggcccagggc
atggggcttctcgaagcggccatggaagcctcccgcctccgtctccgccccatcctgatg
acctccctggccttcaccttcggcgtgctgccgatggccctgacccggggggccggcgcc
gcggcccagaacgccatcggcaccggcgtggtcggcggcatgctgacggccaccttcatc
gccatcttctacattcccctgtccttcgtcctggtcagccagctgttcaggaagaagcgc
caggagcctgtccccgcaagcgtcgggaattccgaggaggggcagccatga
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