Geospiza fortis (medium ground-finch): 102031762 Help Entry 102031762         CDS       T03755                                  Symbol THBS1 Name (RefSeq) thrombospondin 1   KO K16857   thrombospondin 1 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04115   p53 signaling pathway gfr04145   Phagosome gfr04148   Efferocytosis gfr04350   TGF-beta signaling pathway gfr04510   Focal adhesion gfr04512   ECM-receptor interaction gfr04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gfr00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     102031762 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102031762 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102031762 (THBS1)    04148 Efferocytosis     102031762 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     102031762 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102031762 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102031762 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gfr04131]     102031762 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gfr00536]     102031762 (THBS1) Membrane trafficking [BR:gfr04131]  Endocytosis   Phagocytosis    Opsonins     102031762 (THBS1) Glycosaminoglycan binding proteins [BR:gfr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102031762 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C cEGF EGF_3 TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  102031762 NCBI-ProteinID:  XP_014166272 UniProt:  A0A6I9ZDQ2 LinkDB All DBs Position Un AA seq 1211 aa AA seqDB search MGPATALCLLLLVLGGSETKRTAESRNDDNSVFDLFELIGFMKKGAGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS GHVFSLVSNGKAGSLDLSLSADGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EARGTQVCNKQDCPIDGCLSNPCFAGATCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMSNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDLIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRGKNDTAFKRSYINELVQEHKSQEGK LNCDLSWFRFK NT seq 3636 nt NT seq  +upstreamnt  +downstreamnt atggggccagcgactgctctctgcctccttctcctcgtgctcggcggctcagagaccaag cgtactgcagagtcccggaatgatgataacagcgtcttcgatctctttgaactcattggc ttcatgaagaagggagctgggcgccgggcccctggggtgtacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactcc aagttccaagacttattagatgccattcatgctgagaaaggcttcattctcctggccact ctccggcaagccaagaagagcagaggcacattgctctccgtggaacagaaagatggctct ggtcatgtcttcagtctagtatcaaatggcaaggcaggctccctggacctcagcctttct gctgatggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacattgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa atggagaacgctgaactggacatccccatccagaacatcttcactagggacctcgccagc agtgccaggctccgtattgccaaaggaggagtcaatgacaacttccagggtctgctgcag aatgtgcggtttgtgtttggaacaactctggaaactatcttgcggaacaaaggctgctcc agctccactagtgcaatcattactttggacaaccccatcaatggttccagcccagctatc cgcactaattacattggccataaaacaaaggacatccaagcagtctgtggattttcctgt gatgaactaacaaatatgtttgtggaactgcaagggctgcggtccatggttacaacactt caagacagagtccgaaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc actcctggagcgtgcattcataatggagtcttgcacaaaaataaagaggagtggactatt gacagctgcactgaatgtacttgccagaactctgccactatatgccggaaagtgtcctgt cctctcatgccttgttccaatgccaccgtgcctgatggggagtgctgccctcggtgctgg cctagcgactatgcagatgatggatggtctccttggtctgaatggacctcgtgttctgtg acctgtggtaatgggattcagcagagaggccgttcctgtgacagtctcaacaaccgctgt gaaggctcctctgtacagactaggacttgccaccttcaggagtgtgataagagatttaaa caggatggtggctggagtcactggtcgccatggtcatcatgctctgtcacttgtggcacg ggcatcattactagaattcgtctttgcaactctccagtaccacagctgaatggcaaacct tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcag aagcgaagccgtctctgcaataatcccgagcctcagtatggtgggaagacttgtgtaggt gaagctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtct aatccctgctttgcgggggctacgtgcaccagtgcccctgatggttcctggaagtgtggt gcctgtcctgctggctaccatggtgatggtattcactgccaagacattgatgagtgcaaa gaggttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacct gggtacaactgtctgccctgcccaccacgtttcactggaacacagccatttggccgcagt gttgaggatgccatgagtaacaaacaggtctgcaagccacgtaatccatgcacagatgga acacatgactgtaacaagaatgccaaatgcaattaccttggccactttagtgaccccatg tatcgctgtgaatgtaaaccaggctatgctggcaacggcatcatctgcggagaagatact gacttggatggatggccaaatgagaacctggtttgtgttgccaatgctacttaccactgt aaaaaagataactgccctaatctgcctaactcagggcaggaagactatgataaggatggg attggtgatgcctgtgacagtgatgatgatgatgatggcattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgc tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagaa ggagatgcatgtgcaatagatattgatggagatggggtgcttaatgaaagggacaactgc cagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt gataactgtccactggaacacaaccctgaccaggaagataccgattctgacctcataggt gatcaatgtgacaacaaccaggacatagatgaagatggtcatcaaaataaccttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagacaactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac tttgaccaagacagcgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaaaatttcagatgattcccctggatcccaaaggaacatcccagaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgac cctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggtaccttcttt atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcaaggctattcaggtctctccatcaaagttgtgaattccaccactggtccagga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgatcctcgtcacataggctggaaagacttcactgcatacaggtggcgacttagc catagaccaaagaccggctacatcagggttgtaatgtatgaagggaagaaaatcatggca gactcaggaccaatctacgataaaacctatgctggtggtcggctaggattatttgtcttc tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagaggtaagaatgacact gcatttaagagatcctatataaacgaattggttcaagaacataagagccaagagggaaag ttgaactgtgatctttcgtggttcaggttcaaatga

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