Geospiza fortis (medium ground-finch): 102032318
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Entry
102032318 CDS
T03755
Symbol
TRPC6
Name
(RefSeq) transient receptor potential cation channel subfamily C member 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102032318 (TRPC6)
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102032318 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
102032318
NCBI-ProteinID:
XP_005417782
UniProt:
A0A6I9HD21
LinkDB
All DBs
Position
Un
AA seq
818 aa
AA seq
DB search
MFNDHSTSLSLEEERFLDAAEYGNIPVVRKMLEECPSLNVNCVDYMGQNALQLAVANEHL
EITELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAEGKRLALSPSQSELQHDDF
YAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPHDYFCKCSECNQKQKHDS
FSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCK
DFVVGLLDLCRNTEEVEAILNGDVEMSHNNGEHGRPSLSRLKLAIKYEVKKFVAHPNCQQ
QLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAPCSKLGRIMRGPFMKFVA
HAASFTIFLGLLVMNAADRFDGTKLRPNETTDNVKQLFRMKTSCFSWMEMLIISWVVGMI
WSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASRAQNIVDANMKDLT
SPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLG
RTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTVEESFKTLFWAIFGLSEV
KSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAK
LWFSYFEEGRTLPVPFNLVPSPKSLLYLLIRIKKCISKLVLCQKKSFQEDAEMNKLDQRK
QSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKESDEVNEGELKEIKQDISS
LRYELLEEKSQNSEDLAELIRKLGEKLSLDSKEEESKR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgaccactccaccagcctttccctggaggaggagcgcttcctggacgccgcc
gagtatggcaatatcccggtggttcgcaaaatgctggaggaatgtccctcgctcaacgtc
aactgcgtggactacatggggcagaacgccctgcagctggcagtggccaatgagcacctg
gagatcaccgagctgctgctgaagaaggagaacctggcccgggtgggggacgccttgctg
ctggccattagcaagggctatgttcggatcgtggaggccatcctgagccaccccgcgttc
gccgaaggcaagaggctggctctgagtcccagccagtcggagctgcagcatgacgacttc
tacgcgtacgatgaggacggcacgcggttctcgcacgacgtgacgcccatcatcctggcg
gctcactgccacgagtacgagatcgtgcacaccctgctgcgcaagggagcgcgcatcgac
aggccgcacgactacttctgcaagtgcagtgagtgcaaccagaagcaaaagcatgactct
ttcagccattctaggtccaggatcaatgcctacaaaggtctggccagccctgcttacctg
tctttgtccagtgaagacccggtcatgactgccttagagctcagcaatgagctggctgtg
cttgccaacatcgaaaaagagttcaagaatgattacaagaaactgtctatgcaatgcaaa
gatttcgtagttggactgcttgatttgtgcagaaatacagaagaagtggaagctattctg
aatggtgatgtggagatgagccataataatggagagcatggtcgtccgagcctcagccgc
ttgaaactcgccatcaagtatgaagttaaaaaatttgtagcacatccaaactgccagcag
cagctcctctctatttggtacgagaatctgtcgggtttgcggcagcagacgatggcagtg
aagtttctggttgtcctcgcggttgcggtcggattgcccttcctctccatggcctattgg
attgctccttgcagtaagctggggaggataatgcgtggaccattcatgaagtttgtagcc
catgcagcctctttcaccatttttcttggtctacttgtcatgaatgcagctgacaggttt
gatggcaccaaactccgacccaatgaaacaacagacaacgtaaaacagctttttaggatg
aaaacatcctgtttctcatggatggagatgcttattatttcttgggtagtaggcatgata
tggtctgaatgtaaagaaatttggtcccaaggtccaaaggaatacctgtttgagttatgg
aatatgcttgattttggtatgttagcaatttttgcagcatcatttatagcaaggtttatg
gcattttggcatgcatccagagcccagaacatcgttgatgcaaatatgaaagatctgaca
agtccaacactggagcccaacataaaatactacaccttggccagaataaactgggatcca
tcagaccctcagatcatttctgaagggctgtatgcaattgcagtggtgttaagtttctca
cggatagcctacatcttaccagctaatgaaagctttggaccactgcagatatcacttggc
agaaccgttaaagacatcttcaagtttatggtgatatttatcatggtgtttgtggctttc
atgataggcatgtttaatctctattcctactatctgggggcaaaacaaaatgaagctttc
acaactgttgaagaaagcttcaaaacattgttctgggctatatttggactctcagaagtt
aaatcagttgttatcaattataaacacaaatttattgaaaatattggttatgttctttat
ggagtctataatgttaccatggtcatcgtcttactgaacatgcttatcgcaatgatcaac
agttcattccaggaaattgaggatgatgctgatgtagaatggaaatttgcaagggctaaa
ctttggttttcttactttgaagaaggaagaactcttccagtacccttcaacttagtgcca
agcccaaaatctttgctttatctcctaatcagaataaaaaaatgtatttctaaactggtt
ttgtgccaaaagaaaagctttcaggaagatgcagagatgaacaagcttgatcaaaggaag
caatcgagtataagaagctcagatgaaatccacttaaacagtttaaacaatcctccaaga
caataccagaaaataatgaagcgtcttattaaaagatacgtgttgaaagcgcagatagat
aaggaaagtgatgaagtcaatgaaggtgaattgaaggaaattaaacaggacatctcaagt
ctccggtatgaactccttgaggaaaaatctcagaattctgaagatctggcagaacttata
aggaaacttggggaaaaactgtcacttgactctaaggaagaagaaagcaagagataa
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