Geospiza fortis (medium ground-finch): 102032483
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Entry
102032483 CDS
T03755
Symbol
BRE
Name
(RefSeq) brain and reproductive organ-expressed (TNFRSF1A modulator)
KO
K12173
BRCA1-A complex subunit BRE
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102032483 (BRE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102032483 (BRE)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102032483 (BRE)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102032483 (BRE)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
102032483 (BRE)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
102032483 (BRE)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
102032483 (BRE)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102032483 (BRE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
102032483
NCBI-ProteinID:
XP_005416259
UniProt:
A0A8N5EQ67
LinkDB
All DBs
Position
Un
AA seq
383 aa
AA seq
DB search
MSPEVALNRISPALSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPSCDRFKLHI
PYAGETLKWDIIFNAHYPDLPPDFIFGEDAEFLPDPSALHNLASWNPSNPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDVNEDPGEDVALLSVSFEDAEATQVFPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
RAKTYFKTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgaagtggccttgaacagaatttctccagcactttcgcccttcatttccagt
gtggtcaggaatggaaaagtaggactagatgctacgaattgtttacggattacagacttg
aagtctggctgcacatccttgacccctggacccagctgtgatcgttttaaactacatatc
ccttatgcaggagaaacactcaaatgggatataatttttaatgctcactatcctgaccta
ccaccagattttatctttggagaggatgctgagtttttgccagatccttctgccttgcat
aatttagcttcctggaatccttcaaatccagaatgcctgctgcttgttgtgaaagagctt
gtgcagcagtatcatcaatttcagtgcagccgattacgggagagttctcgtctcatgttt
gagtatcagactttacttgaagagccccagtatggagaaaacatggaaatctatgctggc
aaaaaaaacaactggaccggagaattctcggctcgcttcctcttgaagttgcctgttgat
ttcagcaatattcctacataccttcttaaggatgtgaatgaagaccctggagaagatgtt
gcgctcctctccgttagttttgaggacgcagaagctactcaggtttttcctaaactgtac
ctctccccgcgtattgaacatgcgcttggaggatcatctgcccttcacatcccagccttt
cctggtggaggttgtctcattgactatgtaccccaagtatgccagctgctaacaaacaag
gtacaatatgttattcagggataccataagagaagagagtacattgcagctttcctgagt
cactttggaactggtgtggtggaatatgatgcagaaggattcacaaagcttactctgttg
ctgatgtggaaagatttttgcttccttgttcacattgacctacccctctactttcctcga
gaccaaccaaccctaacatttcagtctgtctaccacttcactaacagtggccagctgtac
tcccaagcccagaagaattacccatacagccccagatgggatggcaatgaaatggccaag
agagcaaagacatatttcaagacatttgtccctcagttccaggaggcagcatttgctaat
gggaagctttag
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integrated database retrieval system
