Geospiza fortis (medium ground-finch): 102035230
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Entry
102035230 CDS
T03755
Symbol
PTPRC
Name
(RefSeq) protein tyrosine phosphatase, receptor type C
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04514
Cell adhesion molecules
gfr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102035230 (PTPRC)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102035230 (PTPRC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gfr01009
]
102035230 (PTPRC)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gfr04090
]
102035230 (PTPRC)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
102035230 (PTPRC)
Protein phosphatases and associated proteins [BR:
gfr01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
102035230 (PTPRC)
CD molecules [BR:
gfr04090
]
Proteins
102035230 (PTPRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Tc-R-P
PTP-SAK
Y_phosphatase3
DSPc
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
102035230
NCBI-ProteinID:
XP_014163588
LinkDB
All DBs
Position
Un
AA seq
1221 aa
AA seq
DB search
MFDVPLFRXKFPASQYGSAAALHPGGVGSCPSVPPRPGTPDXSMTDPAVPLTAGASLAHS
THLSPHGTAPSSTARSSGSAAPTARTPSAFGDAPADDYNSTSLHSTTSSVNMPASTGISP
TPSSTYTIETTTVIPEATCAIIEDIKDSKNNSNMAEVFLKNLTKHTEYIILGHDRGRTVS
FSDRSVELPKCRNYTVQVKNGRCSDGTSSSFLVPEVPRESLKVEDPTNTSALLCWSSSLA
CANVTVTCNGTSHSFHPMHSEHKNQTCKVLKNLLPNRLYDCIGSIHFYENNVANQSFTIH
TDYGVPGAPQKLEIVHTNTTGVAVNWTAPGDTSNGPINGYIVNFLVEGEVFHHGEINTTH
YSFYGFKPYTRASVSVTPYTTNKHNYRLEGSSESREFTTAAGVPEKVNHIKTILTADNAV
QITCKNQSVFGPHAEFILIWENDEKPERESKCEFKRENLFYLTNYTFKIFVFNGEHDGPE
VVGSIKTRYNSKALIIFLVFLIIVTVIALLLVLYKIYDLHQKKLSNSSEGVNLVAIKDDD
KQLLNIEPIPSELLLDTYKRKIADEGRLFLEEFQSIPRVFSKFSIKEAKKTHNQNKNRYI
DILPYDHNRVELSEMPGDPGSDYINASYIDGFKEPRKYIAAQGPKDETTDDFWRMIWEQK
ATIIVMVTRCEEGKRNKCAQYWPSMENGTATYGDIIVKIYESKTCPDYVIQKLHITNGRE
RTAGRDVTHIQFTSWPDHGVPEDPHLLLKLRRRVNALSNFFSGPIVVHCSAGVGRTGTYI
GIDAMLEGLDAEGRVDVYGYIVKLRRQRCLMVQVESQYILIHQALVEYNQYGETEISLSE
LHSSLNNLKRKDHPSEPSLLEAEFQRLPSYKGWRTQNIGNRDENKSKNRNANIIPYDFNR
VPIRHEEDCSKEAEHDSDESSDEDSDCEESSKYINASFITGYWGPKAMIATQGPLQETIS
DFWQMVFQRKVKVIVMLTELKEGDQELCAQYWGEGKQTYGGIEVQMADVSSGPNYTIRAF
DVAHLKTKETQKVYQYQYHQWSGCDVPETPKDLVSMILNIKQKLPARPVTEDNRRARSVP
LLVHCCDGSQQTGVFCALMTLLESAETEEVIDVFQVVKSLRRTRLGMVSTLEQYQFLYDT
IASTYPAQNGQIKKNSQQEDKVEFCSEVGKSDQETDLITTDLAPPRPEEIEPPEICGGSK
AADSTKGTESSTNGPTTAVLT
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtgcctttgtttcgttaaaaattcccagcgtctcagtatgggagtgctgca
gcactgcaccctggtggtgtaggcagctgtccctctgtccctcctcggccgggcacaccg
gatnggagcatgaccgaccctgctgtccctctcaccgcaggtgccagcctcgcacacagc
acgcacctctccccgcacggcacggccccgagcagcacggcacgcagcagcggctccgct
gcccccaccgcacgcactccctctgccttcggggatgctcctgcagatgattacaattca
acatccttgcacagcaccacttcatcagtcaacatgccagcaagcactgggatcagcccc
actcccagctccacttacacaatagaaactaccacagtgatacctgaagcaacttgtgct
attatcgaagatataaaagactctaagaacaactcaaacatggctgaagttttcctgaaa
aatctcacaaaacacacagaatatattattctggggcatgacagaggcagaactgtgagt
ttcagcgaccgttcagtagagcttccgaaatgccggaattacactgtccaagttaaaaat
ggcaggtgttcagatggtacttcttcttcttttcttgttccagaagtcccaagggaatct
cttaaagtcgaggacccaaccaacacatctgccttgttatgctggagtagctcacttgcc
tgtgctaacgtgactgtcacctgcaatgggacatcacattcattccatccaatgcattct
gaacataaaaatcaaacttgcaaagtgctgaaaaatttattgccaaaccgtctgtatgac
tgcattggatccatacatttttatgaaaacaatgttgccaaccaaagcttcaccatacat
acagactatggtgttccaggagcaccacaaaagcttgaaatagtacatacaaataccaca
ggtgtagcagttaattggacagcacctggggacacttccaatggtcccataaatggctac
attgtgaatttcttggtagaaggtgaagtgtttcatcacggtgaaatcaacacaactcat
tatagtttctatggatttaaaccttataccagagcttctgtatctgtgactccatataca
accaacaaacacaattacaggcttgaaggtagcagtgaaagccgtgaatttacaacagct
gcaggagtaccagaaaaagtgaatcacattaaaacaatattgacagctgataatgctgtc
cagattacatgcaaaaaccaaagtgtgtttggaccacatgcagaatttatattgatttgg
gagaatgatgaaaaacctgaaagggaaagcaaatgtgaatttaaaagagaaaatctcttt
tacctgacaaactatacatttaagatcttcgtctttaatggagaacacgatgggccagaa
gtagtggggagtataaaaaccagatataattctaaagccttgattatattcttggtattc
ttgatcattgtgactgtaattgctttactgctggttctgtacaaaatctatgatcttcac
caaaaaaagcttagcaattcttcggaaggcgtgaaccttgttgcaattaaagatgatgac
aagcaacttctcaacatagagccaataccctcagagctattgctggacacatacaagagg
aagattgcagatgaaggaaggctcttcttggaagaatttcagagtattcctagagtcttc
agtaaattttctataaaagaggccaaaaagacccataatcagaacaaaaaccgttacatt
gatattcttccatatgaccataaccgtgttgagctctcagagatgccaggagatccagga
tcagactatatcaatgcaagttatattgatggcttcaaagaaccaagaaaatatattgct
gcacaaggccccaaggatgaaaccacagatgatttctggagaatgatctgggaacagaag
gcaaccattattgtcatggtgactcgctgtgaggaaggaaagaggaacaaatgtgcccag
tactggccatcaatggagaacgggactgcaacgtatggggacatcattgtgaagatctat
gaaagtaaaacatgtccagactatgtcattcagaaactgcacatcacaaatggaagagaa
aggacagctggaagagatgtcactcatatccaattcacaagctggccagatcatggagtc
cctgaggatccacatctccttctcaaactccgacgcagagttaacgccctcagcaacttt
tttagtggtccgatcgtggttcattgcagtgccggcgttgggcgcacggggacatacatc
gggatcgatgccatgctggaggggctggacgcagagggcagagtggatgtttatggatac
atcgtgaaactgcgtcggcagcgatgcctcatggtccaagtagagtcacagtacatcctt
attcatcaagcactggtggaatacaatcagtatggagaaacagagatcagtctctcagaa
ctgcattcctcccttaacaatctgaaaagaaaagaccacccaagtgagccttctctgctg
gaggcagagttccagcgattgccttcctataaggggtggcgaacacagaacattgggaat
cgggatgaaaataaaagcaaaaataggaatgccaacataattccttatgactttaaccgg
gtgcccatcaggcacgaagaagattgcagtaaggaggctgagcatgattcagatgagtcc
tcggatgaggacagcgactgtgaggaatccagcaaatacatcaatgcttccttcataact
ggttactggggtccaaaagccatgattgcaacacagggaccactgcaggaaactatctct
gacttctggcaaatggtgttccaaagaaaagtcaaagtcattgttatgctgacagagctg
aaggagggagatcaggaactctgtgcacagtactggggagaaggaaagcaaacatatggt
ggcatagaagttcaaatggcagatgtcagctctggtcctaactataccatacgtgcattt
gatgttgcacatctgaagacaaaagaaactcagaaggtgtatcagtatcagtaccatcaa
tggagtggctgtgatgttccagaaacccctaaagatttagtcagcatgattctcaacatt
aaacaaaaacttccagccagaccagtcactgaggacaacaggagagcccgcagtgtccca
ctgcttgtccactgctgtgatggatcacagcagactggtgtattttgtgctttaatgacc
cttttggaaagtgcagaaacagaagaagtaatagatgttttccaagtagtaaaatcactt
cgtcgcaccaggctgggaatggtctccaccttggaacaataccaatttctgtatgacacc
attgccagtacctaccctgcacagaatggacaaataaagaagaacagccagcaggaagat
aaagttgaattttgcagtgaagtaggaaaatcagatcaggaaactgatttgatcacaact
gatcttgccccaccacggccagaggaaattgaaccacctgaaatatgtggtggttctaag
gctgcagatagcactaagggaacagaaagctctacaaatggccccacaactgcagttcta
acttag
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