Geospiza fortis (medium ground-finch): 102035642
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Entry
102035642 CDS
T03755
Symbol
PHC1
Name
(RefSeq) polyhomeotic homolog 1
KO
K11456
polyhomeotic-like protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102035642 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102035642 (PHC1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
102035642 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
102035642
NCBI-ProteinID:
XP_005427457
UniProt:
A0A6I9HRS6
LinkDB
All DBs
Position
Un
AA seq
983 aa
AA seq
DB search
METESEQNSNSTSGSSSSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QFNSAQLHSLAAVQQATIAASRQASSPNTSTSQQTTTTQASINLATTSAAQLISRSQSVS
SPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPNG
AVAAVQQEVPPTQSPGVHADTDQVQNLAVRSQQTSATNAQLQGCAQKTALPGSSQASGLP
QAASTGQSMAVAQASSSGAAQSLNLSQAAAGSNGVSGGVVATGGSQPSMALSQSSSAGAA
GSCQRKGTGVVHGSQGSQTETENAAAKKGDTDSGGQQTVGMNLTRTATPAPSQTLISSAT
YTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHQQQFQHRQSQLLHTATHLQLAQQQQQQQA
ASLTQQQQQAQPPQQQAPPQNQQQAQTLVVQPMLQSQPPHLQLQQDSPCQPATKSPVPIQ
SKSLVTPIKPPQLGPAKMSATQQPPPHIPVQVVGTRQQGSGQAQALGLAQIAAAVPTSRG
MPAVVQPVSQTHAASPSSSSAPASSQEAPPLTTGVNLAQVQGTAHMVKSPASSPVVAQMP
AAFYMQSVQLPGKSQTLAVKRKAESEEEKEEPAGVTTLVPARSSPVTDNPKNMEEKSGLG
DNSDPGAIATPNATSSEGVSATPTSASTPNLALVSRQMGDSKPPQAIVKPQILTHIIEGF
VIQEGAEPFPEVCSQLLKESEKPLQGDAPSGQNENLSSNSLGEDNASMELDKKANLLKCE
YCGKYAPASQFRGSKRFCSMTCAKRYNVSCSHQFRLQRKKMKEFQEANYARVRRRGPRRS
SSEIARTKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRASHGERDLANSNMAPP
TPDLHGINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLM
SAMNIKLGPALKICAKINVLKET
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaagtgagcagaactccaactccaccagcgggagctccagttctggagga
agcacccggcctcagatctcgcagatgtctctctatgagcggcaggcagtacaggctctg
caggcactccagagacagcccaatgcagcccagtacttccatcagtttatgctccagcag
cagtttaacagtgcccaacttcacagcctggctgctgtccagcaggctacaattgcagcc
agtagacaggccagctcccccaacactagcacctcgcaacagaccaccaccacccaggct
tctatcaaccttgccaccacgtcagctgctcagctgatcagccgatcgcagagcgtgagc
tccccgagtgccaccacgctgacgcagtctgtgctcctcgggaacaccacctcacctccc
ctcaaccagtcacaggctcagatgtaccttcggccgcagctggggaacctgttgcaggtg
aaccggaccttgggccgcaatgtgcctctcgcctcccagctcatcctgatgcccaatggg
gctgtggctgctgtccagcaggaggtaccacccactcagtctcctggggtgcacgcagac
acagaccaggtgcagaacttggctgtgaggagccagcagacctctgccactaacgcccag
ctccaaggctgtgctcagaagacggccctgccaggcagctcccaggcctcgggcttacca
caggccgccagcacgggccagagcatggccgtggcccaggcctcctccagcggggcagcc
cagtccctcaacctgagccaggcagcagcgggcagcaatggtgtctccgggggcgtggtg
gccactggtgggagccagccctcaatggcactgagccagagctcctcagcaggtgccgct
ggcagttgccagaggaagggcactggggtggttcatgggagccagggcagccagacagag
acggagaacgcagctgcaaagaagggtgacacagacagcggtgggcagcaaacagtgggc
atgaacctcaccaggacagctacaccagcacccagccagacgctgatcagctcagcaaca
tatacgcagatccagccacactcactgatccaacagcagcagcagatccatctgcagaag
caggtggtgatccagcagcagatagccattcaccagcagcagttccagcaccgccagtcc
cagctcctccacacagccacgcatctccaacttgctcaacagcagcaacagcagcaagca
gcatctctgacccagcagcagcagcaagctcagcctccacagcagcaggctccccctcaa
aaccagcagcaggcacagacccttgtggtgcaacctatgttgcagtcccagccaccgcat
ttacagctccagcaggacagtccgtgccagccagccaccaagtcacctgttcctatccag
tcaaaatctctggtcacccccatcaaaccccctcagcttgggcctgccaaaatgtcagca
acacagcagcctcctccacacatcccggtgcaggtggtgggcactcggcagcagggctca
ggccaagcccaagcattgggcttggctcagattgctgcagcggtgccgacttcccgggga
atgccagctgtagtccagcctgtttcccaaacccatgctgcttccccatcatcatcttca
gctccagcatcctcacaggaagctccccctctcaccacaggggtgaatttggcacaagtt
caaggcacagcccacatggtgaagagcccagcttcctctccagttgtggctcagatgcca
gcagcattctacatgcagtctgtccagttgccaggcaaatctcagaccttggcagtgaag
cgcaaggcagagtcagaggaagagaaggaggagccagccggtgtcaccaccctcgtgcct
gccaggtcctctcctgtaacagacaaccccaaaaacatggaggagaagagtggccttgga
gataattctgatcctggtgccattgcaaccccaaatgccacatcaagtgaaggagtctca
gccacccccacctctgcttccaccccaaacctggcattggtgtcacgtcagatgggagac
tccaaacctcctcaagccatcgtcaagccccagatcctcacacacatcattgaaggcttt
gtcatccaggaaggagcagagccctttccagaggtttgttctcagctgttgaaagaatct
gagaaaccactgcagggagacgctccttctggtcagaatgaaaacctgtccagcaattct
ctgggagaggataatgcttccatggagcttgacaagaaggcaaacttgttgaagtgtgaa
tattgtgggaagtatgccccagcaagccagttccgtggctccaagaggttttgttccatg
acctgtgccaaaaggtacaacgtcagctgcagccatcagttccggctgcagagaaagaag
atgaaggaattccaggaagccaactatgcccgtgtgcgccgacggggaccacggcgcagc
agctccgaaatcgctcggacaaagatccagggcaagcgccacaggggccaggaagactcg
agtcgaggctctgataactccagctatgatgaagctttgtcccctacatctccaggaccc
ctgtcagtaagggccagtcatggagagagggacctggcaaactctaacatggccccacct
accccagatctacatggcatcaacccagtcttcctgtcgagcaaccctagtcgttggagt
gtggaggaagtgtacgagttcattgcatcattgcaagggtgccaagaaattgctgaggaa
tttcggtcacaggaaatcgatggtcaggccctgttgcttctgaaggaggaacatctcatg
agtgccatgaacatcaagctgggaccagctctcaagatctgtgccaagatcaatgtcctc
aaggagacctaa
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