Geospiza fortis (medium ground-finch): 102035974
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Entry
102035974 CDS
T03755
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00900
Terpenoid backbone biosynthesis
gfr01100
Metabolic pathways
Module
gfr_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102035974 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gfr01006
]
102035974 (GGPS1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
102035974 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
102035974 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
102035974 (GGPS1)
Prenyltransferases [BR:
gfr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
102035974 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
PhiKZ_VTX
Motif
Other DBs
NCBI-GeneID:
102035974
NCBI-ProteinID:
XP_005423257
UniProt:
A0A6I9HL49
LinkDB
All DBs
Position
Un
AA seq
299 aa
AA seq
DB search
MDGMDETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASL
LVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLNHPDAVKVFTRQLLE
LHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNTLG
LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENI
DIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVQQLSKMFKETEN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatggatgaaacatctaaaagaatcctagagccataccagtatttgcttcaa
ctaccaggtaagcaagtgagaaccaaactgtcacaggcctttaatcactggctgaatgtt
ccagaagataaaatacaggttatcattgaagtgacagagatgttgcacaatgcaagcctt
cttgtggatgatattgaagataactcaaagctacgacggggctttccagtggcacacagt
atctatggaattccatctgtaatcaactgtgctaattatgtttattttcttggcttagag
aaggttttaacccttaatcatccagatgctgttaaagtttttacccgtcaacttctggaa
ctgcataaaggtcaaggcttggatatttactggagggatacatacacctgtcctacagag
gctgagtataaagccatggtactgcaaaagacaggcgggctcttcggattagctgtaggc
ctcatgcagctcttctcaaattataaaaaggacttaaagccgctccttaacacacttggt
ctcttcttccaaataagagacgactatgccaacttgcactccaaagaatatagcgagaac
aagagcttttgtgaagacttaactgagggcaagttctcattcccaaccattcatgcaatt
tggtcaagacctgaaagtactcaggtgcaaaacattttacgtcaaaggacggagaacata
gatataaaaaaatactgcgtacattaccttgaaaatgttggttcctttgagtacactcgg
aatacattgaaagagcttgaatctgaagcctataagcaaattgaatcacttgggggaaac
cctgagcttgtagcactagttcaacagctgagcaaaatgttcaaagaaacggaaaattaa
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