KEGG   Geospiza fortis (medium ground-finch): 102037823
Entry
102037823         CDS       T03755                                 
Symbol
RBX1
Name
(RefSeq) ring-box 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03420  Nucleotide excision repair
gfr04110  Cell cycle
gfr04114  Oocyte meiosis
gfr04120  Ubiquitin mediated proteolysis
gfr04141  Protein processing in endoplasmic reticulum
gfr04310  Wnt signaling pathway
gfr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102037823 (RBX1)
   04120 Ubiquitin mediated proteolysis
    102037823 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102037823 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    102037823 (RBX1)
   04350 TGF-beta signaling pathway
    102037823 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102037823 (RBX1)
   04114 Oocyte meiosis
    102037823 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gfr04121]
    102037823 (RBX1)
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102037823 (RBX1)
Enzymes [BR:gfr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     102037823 (RBX1)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   102037823 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     102037823 (RBX1)
   Cul2 complex
     102037823 (RBX1)
   Cul3 complex
     102037823 (RBX1)
   Cul4 complex
     102037823 (RBX1)
   Cul7 complex
     102037823 (RBX1)
   Cul8 complex
     102037823 (RBX1)
   Cul9 complex
     102037823 (RBX1)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102037823 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102037823 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 102037823
NCBI-ProteinID: XP_014162833
LinkDB
Position
Un
AA seq 175 aa
MERHSVQMDLEEVALQRGRISRDPQSWVRVLSPAIPCSFSKKHLDCGRTKGYSGNTAGPT
SSCLDYDGRKQVRSSLRAEAPHVKSGGGKPQGMWNAVALWAWDIVVDNCAICRNHIMDLC
IECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 528 nt   +upstreamnt  +downstreamnt
atggagcggcacagtgtacaaatggatttagaagaggtggctctgcagagaggtcgcatc
tccagggacccgcaaagctgggtgcgcgtcctgtctccagcaattccatgttccttttca
aaaaaacacctggactgcgggagaacaaagggctatagcggcaacaccgccgggcccacc
tcgtcctgcctcgattacgatggacgaaaacaagttagaagttcattgagggctgaagcc
cctcacgtgaagagtgggggaggcaaaccgcaggggatgtggaatgccgtggccctgtgg
gcatgggacattgtggttgataactgtgccatttgcagaaaccacattatggatctgtgc
atagaatgtcaagccaaccaagcatcagctacctctgaggagtgcacagttgcatggggc
gtctgcaatcatgctttccacttccactgcatctctcgctggctcaaaactcgccaagta
tgtccgctggacaacagggaatgggagttccaaaagtatggacactag

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