Geospiza fortis (medium ground-finch): 102039498
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Entry
102039498 CDS
T03755
Symbol
POLK
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102039498 (POLK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102039498 (POLK)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102039498 (POLK)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
102039498 (POLK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
RNF220
IMS_HHH_1
Cdd1
Motif
Other DBs
NCBI-GeneID:
102039498
NCBI-ProteinID:
XP_005428317
UniProt:
A0A8N5I333
LinkDB
All DBs
Position
Un
AA seq
868 aa
AA seq
DB search
MDNLKKVSDSSCNDGLLLRMGLNDNKAGMQGLDKEKINKIIMEATKGSKFYENELKKDQQ
VNQRIEKMMQLKEKITAQQLLKAQVQVDKLVIELEQNRNLSSTIVHIDMDAFYAAVEMRD
NPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPHLTIVPLNFEKYGKVSK
EVREILAEYDPNFMPMGLDEAYLNITEHLEERLNWPEDRRRFFFNTESTTGTDKDCVNMS
AKFNEGEVSSSPVLFEDSTSLMDDEHEQRGLSVENSVLFGTSAEEVVKEIRFRIEQKTQL
TASAGIAPNTMLAKMCSDRNKPNGQYRISPERRAVLDFLKHLPIRKVPGIGKVTEKMLKA
LGIVTCSELYQQRALLSLLFSEVSWRNFLGISLGLGSTHLEKDGERKSMSTERTFSEINT
AEDQYSLCRELCRDLAQELQKEGLKGKTVTLKLKNVNFEVKTRASTVLSSVSTEEEIFTV
AKDLLGTEIDSVAPHPLRIRLMGVRVSGFLTEEEKKYQQKSITSFLKSGKEIGYLRLQPE
KSNQEYFTKNSGAPHRGSFFDQKRAARQLNSENISPDESRGKQLFHDERSSANIVEETKK
VADLPNSNVCKIFTCPVCFEKQSSNNLEELNKHIDECLNGTCVKDTVEISKNDSSRENTS
NFLPQFKTEWVDKCQKNETDQLSGTDQSASVSDSSTDNSTEKFAQIIPDKSPRERQPSNL
SDIARNVCMKQCLFHKQMSQDNEDHFDKTEDKEGSSSSCFFEAKEDSVLVCPVCNSEQKT
TNLMSFNRHVDICLNKGLIQELTEKQDFPTKTYNMESSNRVFSGGLSKGQQCTNPSQGTK
RSGLTASQSISKKPKASNSKHTIKMFFK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctgaaaaaagtttctgacagctcttgcaatgatggacttctacttagaatg
ggccttaatgataacaaagctggaatgcagggtttggataaggagaaaatcaataaaatc
atcatggaagctaccaagggttctaaattttatgaaaatgaacttaagaaagatcaacaa
gttaaccaacgaattgaaaaaatgatgcagctaaaagagaaaattacagcacaacagctc
ttgaaagcacaggtgcaggtggacaaacttgtgatagaactggaacagaaccgtaacctt
agcagtacaatcgtacacattgacatggatgccttctatgcagctgtggaaatgagagac
aatccagagctgaaggaaaaacctatagcagtgggatcaatgagtatgttgtccacctca
aattaccatgctaggagattcggggtgcgtgcagccatgcctggatttattgctaaaagg
ctatgtccccatctaactatagtaccactaaactttgaaaaatacggcaaagtgagtaaa
gaggttagagaaatactggctgaatatgatcccaattttatgcctatgggcctagatgaa
gcctacctgaacataacagagcacttggaggaaaggctgaactggcctgaagatagaaga
aggttcttttttaatacagaaagcactacaggaacagataaagattgtgtgaatatgtct
gccaaatttaacgaaggtgaagtctcttcttcaccagtgctgtttgaagacagcacatct
ctgatggatgacgaacatgaacaaagaggtctatcagtggaaaactcagttctctttgga
acttctgcagaggaagttgtgaaggaaattcgctttaggattgagcagaaaactcaactg
actgctagtgcaggaatagcaccaaatacaatgttagcaaaaatgtgcagtgatcgtaat
aagcctaacggccaatacagaatttctcctgagagacgagcagtgctagacttcttaaaa
catttgcccattagaaaggtgccaggtattggaaaagtaacagagaagatgttaaaagca
ctcggaattgtgacttgctcagaactttaccagcagagggctctgctttctcttcttttt
tcagaagtatcttggcgtaatttcttgggtatttcccttggtttgggctcaacacatttg
gaaaaggatggagaaagaaaaagtatgagcactgaaagaacattcagtgaaattaacaca
gcagaagaccagtacagtttgtgtcgagagctctgcagagaccttgctcaggagttacag
aaagagggacttaagggtaaaactgttacattgaagcttaagaatgtgaattttgaagtt
aaaaccagagcttcaactgtgctgtcttctgtttctactgaggaggaaatatttactgtt
gctaaagatttgttaggaacagaaattgatagtgttgctcctcatcctctacggataaga
cttatgggtgtacgagtatcaggatttctaactgaagaagaaaagaaataccaacaaaaa
agcattacaagtttcttaaaatcaggaaaagaaattggttaccttaggcttcagccagag
aagtccaaccaagagtatttcacaaaaaattcaggagcacctcatagagggagttttttt
gatcaaaagcgagcagcaagacaactaaacagtgagaatatttctccagatgaaagcaga
ggtaagcagctctttcatgatgagagatcatcagcaaatattgtggaagaaacaaagaaa
gtcgccgatttaccaaattctaatgtttgtaagatcttcacctgtcctgtgtgctttgag
aaacaaagcagcaataatttggaagaacttaataaacacattgatgagtgcctcaatggg
acatgtgttaaagatactgtggaaatatccaagaatgacagttcaagagaaaatacatct
aactttcttccacagtttaaaactgagtgggttgataaatgtcaaaaaaatgaaacagat
caattatcaggaacagaccagtctgcaagtgtatctgacagctctactgacaatagcaca
gaaaaatttgctcagataatacctgataaatctcccagagaacgacagcctagcaatctc
agtgacattgctagaaatgtgtgtatgaaacagtgtctcttccacaaacaaatgtcacaa
gacaatgaagaccattttgacaagactgaagataaagaaggaagtagttcatcctgtttc
tttgaagccaaagaagacagtgttcttgtttgtccagtttgtaattcagaacagaaaacc
accaatcttatgtcatttaacagacatgttgatatctgcttaaataaaggccttatccag
gagctgacagaaaaacaggattttccaactaagacttataatatggaaagctcaaacaga
gttttctctggaggtttaagcaaaggacagcaatgcacaaatccttcacaaggaacaaaa
aggtctggactaacagcttcacagtcaatatcaaaaaaacccaaggcaagcaattccaaa
cacacaatcaaaatgttttttaaatga
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