Geospiza fortis (medium ground-finch): 102039737
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Entry
102039737 CDS
T03755
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102039737 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102039737 (IRF5)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102039737 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
Gag_p6
Motif
Other DBs
NCBI-GeneID:
102039737
NCBI-ProteinID:
XP_014166676
UniProt:
A0A6I9ZE32
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All DBs
Position
Un
AA seq
295 aa
AA seq
DB search
MEVKDDTISDEFSQLSPSTGPLIGRVSAKKEKLRGGNPNPAEHQRIRECIGSSTGLGRKE
RLQDDPNPEVSPHFVPVTKPPFSQNPRRDAPSMLPLTRPGSRCGEAPMTDLELKFQYRGR
QVCALTVSNPHGWALFHSSLEPTREQEELFGPLTLEQVPFPAPDTIPNEKQRFYTHQLLD
VLDRGLILELQGQDLFALRLCQCKVFWTGPCAVPQPGPNPIQRETRTKLFSLEGFLNGLI
QFQKGQTPTPPPFEIFLCFGEEWPDQKPKEKKLITVQVRGWPAAGLGHSGVPVPV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaaagatgacaccatcagcgatgaattttcccagctctctccatctactggg
cctttgattgggagagtttcagccaaaaaggagaaactgcggggaggaaaccccaaccca
gcggagcaccagcgtatccgggaatgcatcggcagcagcaccggtttggggcggaaggaa
cgactgcaggatgacccaaaccccgaggtttccccccattttgtccccgtgaccaaaccc
cccttttcccagaatccccgccgagatgctccatccatgctgccgctcacccgcccagga
tcccgctgcggagaagcccccatgactgacctggagctgaagttccagtaccggggccgc
caggtgtgcgccctgaccgtcagcaacccgcatggctgggcgctgttccacagcagcctg
gagcccacgcgggagcaggaggagctctttgggcccctgacgctggagcaggtgcccttc
cctgctcccgacaccattcccaacgagaagcagcgcttctacacccaccagctgctggac
gtgctggaccgagggctcatcctggagctccagggccaggacctcttcgccctgcggctc
tgccagtgcaaggtcttctggactgggccctgtgccgtgccccagcccggccccaacccc
atccagagggaaacaaggaccaagctcttcagcctcgagggcttcctcaacggcctcatc
cagttccagaaggggcagacccccacgccgccccccttcgagatcttcctctgcttcggt
gaggagtggccggaccagaagcccaaggagaagaagctgatcacggtgcaggtgaggggc
tggcccgcggctggcctggggcacagtggggtccctgtcccggtgtga
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