KEGG   Geospiza fortis (medium ground-finch): 102039832
Entry
102039832         CDS       T03755                                 
Symbol
AICDA
Name
(RefSeq) activation induced cytidine deaminase
  KO
K10989  activation-induced cytidine deaminase [EC:3.5.4.38]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102039832 (AICDA)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.38  single-stranded DNA cytosine deaminase
     102039832 (AICDA)
SSDB
Motif
Pfam: APOBEC_N NAD1 APOBEC2 NAD2 SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 DUF2599 Toxin-deaminase
Other DBs
NCBI-GeneID: 102039832
NCBI-ProteinID: XP_005427482
LinkDB
Position
Un
AA seq 198 aa
MDSILMQRRLFLYNFRNLRKAKGRRETYLCYVVKRRDSATSCSLDFGYLRNQMGCHVEVL
FLRYIAAWDLDPGRCYRITWFTSWSPCYDCAQHIASFLRSYPNLSLRIFMARLYFCEERK
AEPEGLRRLHKAGAQIAIMTFKDYFYCWNTFVENREQAFKGWEGLHENSVHLARKLRRIL
LPLYEVDDLQDAFKILGL
NT seq 597 nt   +upstreamnt  +downstreamnt
atggacagcatcctcatgcaaaggagactcttcctctacaacttcaggaacctgcgcaag
gccaagggccggcgtgagacctacctgtgctatgtggtgaagcgccgggacagcgccacc
tcctgctccctggattttggatacctgcgcaaccagatgggctgccacgtggaggtgctc
ttcctgcgctacatcgcagcctgggacctggacccggggcgctgctaccgcatcacctgg
ttcacctcctggagcccctgctacgactgcgcccagcacatcgccagcttcctgcgctcc
taccccaacctgagcctccgcatcttcatggcccgcctctacttctgcgaggagcgcaag
gcagagcccgaggggctgaggcgcctgcacaaggccggggcacagatcgccatcatgacc
ttcaaagattacttctactgctggaacacatttgtggagaacagggaacaggcattcaaa
ggctgggaagggctgcatgaaaactctgtccatcttgccaggaaacttcgacgaatcctc
ctgccactgtatgaagtagatgatttacaagatgcttttaaaattctgggactttga

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