Geospiza fortis (medium ground-finch): 102040520
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Entry
102040520 CDS
T03755
Symbol
TIAM1
Name
(RefSeq) T-cell lymphoma invasion and metastasis 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04530
Tight junction
gfr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102040520 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102040520 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102040520 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
102040520 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
RNA_pol_Rpc82
PH_11
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102040520
NCBI-ProteinID:
XP_005429244
LinkDB
All DBs
Position
Un
AA seq
1306 aa
AA seq
DB search
MGNAESQSVEQALYGDKQPALGRKHTPEAGGSPQPLVACQRANSMSDLYSPKTPGATING
GPRNAFGGYGRSLVSDIPELGSHKMASVGTEDVPSSYSNYNTLPCRKSHCLSEGASNPQM
SHSSSMQGRRAKTTQQSSGTLSSPGQSDILLSAAQGTVRKAGALAVKNFLVHKKNKKVES
ATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFC
LSNSLGDAFLFQTCSQTELENWITAIHSACATAVARQHHKEDTLKLLKTEIKKLEQKIDM
DEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNP
KRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSL
WGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKRDKEVALSSVHQHNPDC
DIWVHEYFTPSWFCLPNNQPALTVIRPGDTSRDVLEMICKTHQLDCSAHYLRLKFLLENQ
MQFYVPKPEEEIYELLYKEIEICQKITQHIQMEKSDASSDIYGFSLSSVEEEGIRRLYVN
GVKDTGLAFKQGLKAGDEVLEINQRAAEELDSALLKEALAQPSLCLTVRTHPEPEEAQRL
GQPPPRRPENPPEAGDSALPFPGGSQGHSLCSDPDSSAEVAPEEAEAQDLESSDEAEKMS
KSTEQVAAFCRSLHEMNPSDCSAPPQDCAGPQLSTMRQLTDADKLRKVICELLETERTYV
KDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLE
KVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRR
QHSSTLESYLIKPIQRILKYPLLLKELFALTDVDSEEHYHLDVAIKTMNKVASHINEMQK
IHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVF
KTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVC
EIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVP
FGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSAALHGSSPEKEPAQGGD
TDRWVEEQFDLAQYEEQEDIKETDILSDDDDFCEAARGAQRELRERLQATSLRPGPPGDA
HAARMAQLRKQAALPALNGAAEGHGEEVIWVRREDFVPSRKLNTEL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcggagagccagagcgtggagcaggccctgtacggggacaagcagccggcg
ctgggccgcaagcacacccccgaggcgggtggcagcccccagcccctggtggcctgccag
cgggccaactccatgagtgacctgtactcccccaaaacccccggcgccaccatcaacggg
gggccccgaaacgcctttggagggtacggccggagcctggtgtccgacatccccgagctg
ggcagccataagatggcctcggtgggcactgaggacgtgccctcctcctacagcaactac
aacacgctgccctgcaggaagtcccactgcctctccgaaggggcctccaacccccagatg
agccatagcagcagcatgcaaggcagaagggcaaaaaccacccagcagagcagcggcacg
ctcagctcgcccgggcagtccgacatcctgctgagcgccgcgcagggcaccgtgcgcaag
gccggggccctggccgtcaaaaacttcctggtgcacaagaagaacaagaaggtggagtcg
gccacgcgcaggaagtggaagcactactgggtgtcgctgaaaggctgcacgttgttcttc
tacgagacggacggcaggtctggcattgaccacaacagcatccccaagcacgcagtctgg
gtggagaacagcatcgtgcaggctgtgcctgagcaccccaagaaggactttgtcttctgc
ctcagcaactcccttggcgacgctttcctcttccagacgtgcagccagacggagctggag
aactggatcacggccatccactcggcctgcgccaccgccgtggcgcggcagcaccacaag
gaggacaccctcaagctgctcaagactgagatcaagaagctggagcagaagatcgacatg
gacgagaagatgaagaagatgggggaaatgcagctgtcctccgtcacagactccaagaag
aagaagaccatactggatcagatcttcgtgtgggagcagaacctggagcagttccagatg
gacctgttccgctaccgctgttacctggccagcctgcagggcggggagctgcccaacccc
aagcgcctgctggccttcgccagccgccccaccaaggtggccatgggccgcctgggcatc
ttctccgtgtcctccttccacgcactggtggcggctcgcacgggggagtcgggagtgagg
aggaggacacaggccatgtccaggtctgccagcaagaggaggagcaggttttcttctctc
tgggggctggacactacctccaagaagaagcaggggaggcccagcattaaccaggtgttt
ggagaaggagtggattcagtgaagaaatctcttgaagggatctttgatgacacagtccca
gatggcaagagggacaaagaagtggccctgagcagcgtccaccagcacaaccctgactgt
gatatctgggtgcacgagtacttcacgccctcgtggttctgcctgcccaacaaccagcct
gccctgacagtcatccggcccggggacacctccagggacgtgctggaaatgatctgcaag
acacaccagctggactgctctgctcactacctgcgcctcaagttcctgctggagaaccag
atgcagttctacgtgccaaagccagaggaggagatctatgagctgctgtacaaggaaata
gaaatctgtcagaaaattacccagcacattcagatggagaagtctgacgcatcctctgat
atttatggtttctctctgtcctcggtggaagaggaggggattcgccggctctacgtcaac
ggcgtcaaggacacgggcctggctttcaagcaaggcctgaaggctggggatgaggtgctg
gagatcaaccagagagctgcagaggagctggactcggcgctgctgaaggaggcgctggcg
cagccctcgctgtgcctcaccgtgcgcacccaccccgagccagaggaggcccagaggctg
ggccagccgcccccacggcgcccagagaacccccccgaggccggggacagcgccctgccc
ttccctgggggcagccaaggacactccctctgcagtgaccccgacagctcagccgaggtg
gccccggaggaggcggaagcgcaggacctggagtcgtcggacgaggccgagaagatgagc
aagagcacagagcaggtcgcagctttctgtcgcagcctgcatgaaatgaacccctctgac
tgcagtgctcccccccaggactgtgcagggccccagctgagcaccatgaggcagctcacg
gacgcagacaagctcaggaaggtcatctgtgagctcctggagaccgagcgcacctacgtc
aaggatttaaattgtctgatggagagatacctgaagcctctacagaaagaaaccttcctc
acaccagatgagctggatgttctctttgggaacctgactgaaatggtagcattccaggta
gagttcctgaaaactctggaagatggagtaaggctggttccagacctggaaaagcttgaa
aaagttgagcaatttaagaaagtgctgttctccctgggtggatccttcctgtactacgct
gacaggttcaagctgtacagtgccttctgtgccagccacacaaaagtccccaaagtcctg
gtgaaagccaagacagacactgctttcaaggcgttcctggatgcccagaacccgcgccgg
cagcactcctccaccctggagtcttacctcatcaagcccatccagaggatactcaaatac
cccctcctgctcaaggagctctttgccctcactgacgtggacagtgaagagcactatcac
cttgatgtggccatcaaaaccatgaacaaagttgccagccacattaatgaaatgcagaaa
atccatgaagaatatggggcagtgtttgaccaactcatagcggagcaaacaggggagaaa
aaagaggtggccgacctttccatgggggacttgctcttgcataacacagtgatatggctg
aaccctcctgcttccctgggcaagtggaagaaggaacctgagctggcagcatttgtgttc
aaaactgccgtggtcctggtgtacaaggatggttccaaacagaagaagaagctgggagga
tcccacagagcctcaatttatgaagactgggatccgttccggttccgccacatgatccct
ttggaggcgctgcaggtgcgggccctggccagtgcagatgcagagaccaattctgtgtgt
gagattgtccatgtcaaatctgagtctgagggcaggccagaaaggacatttcacctctgc
tgtagctctccagagcacaggaaggactttctgaaggcagtgcactccatcctgcgggac
aaacacagaagacagctccttaaaaccgaaagtttgccctcctcccagcaatatgttccc
tttggtggaaaaagattgtgtgctctaaaaggtgcaaggccagccatgaacagggcagtg
tcagcccccagcaagtctctggggaggaggaggcggcggctggcccgaaacaggtttacc
attgactcggcggccctccacggcagcagccccgagaaagagcccgcgcagggaggggac
actgaccgctgggtcgaggagcagttcgacctggcgcagtacgaggagcaggaggacatc
aaggagaccgacatcctgagcgacgacgacgacttctgcgaggcggcgcgcggggcgcag
cgcgaactgcgggagcggctgcaggccacctcgctgcggcccggcccgcccggcgacgcg
cacgccgccaggatggcccagctgaggaagcaggcggccctgcccgccctcaacggcgcc
gccgagggccacggcgaggaggtcatctgggtgcggcgggaggactttgtgcccagcagg
aagctcaacaccgagctctga
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