Geospiza fortis (medium ground-finch): 102040969
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Entry
102040969 CDS
T03755
Symbol
PSEN2
Name
(RefSeq) presenilin 2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102040969 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102040969 (PSEN2)
Peptidases and inhibitors [BR:
gfr01002
]
Aspartic peptidases
Family A22: presenilin family
102040969 (PSEN2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
102040969
NCBI-ProteinID:
XP_005427072
UniProt:
A0A6I9HR94
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Position
Un
AA seq
457 aa
AA seq
DB search
MIAFMNDSDSEEEPCNERTSLMSAESPPVPSYQDGLPASEAGEAQAHRKRRAGSSRGPNN
IAGGEMSGSGVPVRESILENEEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTE
KNGQLIYTPFSEDTPSVGQRLLNSVLNTIVMISVIIVMTVFLVLLYKYRCYKFIHGWLIL
SSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFIVIWNFGAVGMICIHWKGPLQLQQAYLIM
ISALMALVFIKYLPEWSAWVILGAISIYDLMAVLCPKGPLRMLVETAQERNEPIFPALIY
SSAMMWTVGMAKPDTAARGASQQTWDAAEDGREQLRSPSHAESQMSETRGPVPTRPVTLE
ELEEEERGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVFKK
ALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgttcatgaacgactcggacagcgaggaggagccctgcaatgagagaacatcc
ctgatgtctgcagagagccctcctgtgccctcctaccaggatggcctgccagcctcagaa
gcaggggaagcacaggcacacaggaagaggcgagcaggcagcagccgtggcccaaacaat
atcgccggtggagaaatgtctggctcgggtgttccagtgagagaaagcatcctggaaaat
gaagaggaggagctgactctgaaatatggagcaaagcatgtaatcatgctctttgtgcct
gtcaccctttgtatgattgttgtcgtcgccaccataaagtcagtgcgcttctatacggag
aaaaacgggcagctgatctacacccctttcagtgaggacaccccatctgtgggccagcgt
ctcttgaactcggtgttgaacaccattgtaatgatcagtgtcatcattgtcatgactgtg
ttcctggtgctgctctataaatatcgctgctacaagttcatccatggctggctgatcctg
tcctccctgatgctgctcttcctctttacctacatttacctcggggaagtattgaagact
tacaacgtggccatggattatcccactctgttcatagtcatctggaattttggagctgtt
ggaatgatttgcatccactggaaaggtcccttgcagctccagcaagcttatctcattatg
atcagtgctctaatggcattggtgttcattaaatatctacctgagtggtcagcatgggtg
attctaggtgcaatctccatctatgatctgatggctgttctctgtcccaaggggccactg
agaatgttggtagaaactgcacaggagagaaatgagcccattttccctgcattaatatat
tcctctgctatgatgtggacagttggaatggcaaagccagacacagcagcaagaggagca
agtcagcagacatgggatgcagctgaggatggcagagaacagctcaggagcccttctcat
gcagagtctcagatgtcagagacgaggggtcctgttccaacccgccccgtcactttagag
gagctcgaggaggaggaaaggggtgtgaagctgggccttggagacttcatattttacagc
gtgcttgttgggaaagcagctgccacagctagtggggactggaataccacactggcctgc
tttgtagccattctcataggtttatgcctaacacttttactactggctgtttttaagaaa
gcactgcctgctctccccatctccatcacctttggcttgatcttctacttctcgacagac
aacctcgtgcgaccgttcatggacaccctggcctcccaccagctgtatatttag
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