Geospiza fortis (medium ground-finch): 102041827
Help
Entry
102041827 CDS
T03755
Symbol
KDM1A
Name
(RefSeq) lysine demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102041827 (KDM1A)
Enzymes [BR:
gfr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
102041827 (KDM1A)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
102041827 (KDM1A)
REST complex
102041827 (KDM1A)
Histone demethylases
102041827 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
GIDA
MurD-like_N
Lycopene_cycl
IlvN
DUF1180
CdiI_2
Motif
Other DBs
NCBI-GeneID:
102041827
NCBI-ProteinID:
XP_005428745
UniProt:
A0A6I9HRE2
LinkDB
All DBs
Position
Un
AA seq
750 aa
AA seq
DB search
MDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDS
SGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWL
DNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVI
IIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPM
AVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN
NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQY
KEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLS
SRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGL
DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP
LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPI
LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS
YVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA
GRIADQFLGAMYTLPRQPTPGVPPQQAASM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtcttgcaaacctatcagaagatgagtattactctgaagaagagagaaat
gctaaagctgagaaagagaagaaactacccccaccacctccaccagctcctgcagaagaa
gagaatgaaagtgagccagaggagccgtctgggcaagcaggaggacttcaagacgacagt
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagcaga
cttccacatgaccggatgacatcccaagaagctgcctgcttccctgatataatcagtggg
ccccagcagactcagaaggtgtttctgtacatcaggaaccgcactctgcagctctggttg
gataacccaaagattcagctgacatttgaagcaactatccaacaattagaagcaccttat
aatagtgacacagtgctcgttcacagggttcacagctacctggagcgtcatgggctgatc
aactttgggatctacaaaagagtcaaaccccttccaaccaagaagacaggaaaggtgatc
attattggttctggagtctctgggttggcagcagctcgccagttgcagagttttggaatg
gatgtcacagttctggaagccagagacagagtaggaggaagagttgctacctttcgcaaa
gggaattatgttgctgatctgggagcaatggtggtgacaggacttggaggaaatcccatg
gctgtggtcagcaaacaagtaaatatggaattggcaaagatcaaacaaaaatgtccactt
tatgaagcaaatggacaagctgttcccaaagagaaggatgaaatggtggagcaagaattt
aatcgtctgctggaagccacatcctatctcagccatcagctggattttaatgttctcaat
aataaacctgtctccctaggtcaggctctggaggttgtcatacaattgcaggagaagcat
gtgaaggatgaacagattgagcactggaaaaaaattgtgaaaacacaggaggaattgaaa
gatcttcttaacaagatggtgaatttaaaagagaagattaaagaacttcatcagcagtat
aaggaggcatcagaagtgaagccacctcgggatatcacagcagaattccttgtgaaaagc
aagcacagagatctgactgcactttgcaaggagtatgatgaattggcagaaacacaagga
aagctggaagagaaattacaagaacttgaagccaatccaccaagtgatgtttatttgtca
tcaagagacaggcaaatacttgactggcattttgcaaacctagaatttgctaatgctaca
cccctttctacactgtcactgaagcactgggaccaggatgatgactttgaattcacaggc
agtcacttgactgtgaggaatggctactcctgtgtgccagtggccttggcagaagggttg
gacattaaattaaacacagcagttcggcaggttcgctacacggcctcaggttgtgaagtg
atagctgtaaacaccagatctactagccagaccttcatttataagtgtgatgctgtgctg
tgcactctgcccctgggagtgctgaaacagcagcccccagcagttcagtttgtgccacct
cttcctgagtggaaaacttcagcagtgcagaggatggggtttggcaacctgaacaaggtt
gtgttgtgtttcgatcgtgtcttctgggatcccagtgtcaatttgtttggccacgttggg
agcactactgccagcagaggagaacttttcctcttttggaacctgtacaaagcaccgatt
ttgttggccttggtggcaggagaagcagcagggatcatggagaacatcagtgatgatgtc
attgtgggtcggtgtctggccatcctcaaaggcatctttggcagcagtgctgtgccccag
cccaaagagaccgtggtgtcccgctggcgtgctgacccctgggcccggggatcgtactcc
tatgtagctgctggctcctctggaaatgactatgatttgatggctcagccaatcactcca
ggaccagccattccaggtgctccacagcccatccctcggctgttcttcgcgggcgagcac
accatccgcaactacccggccacggtgcacggcgcgctgctgagcgggctgcgcgaggcc
ggccgcatcgccgaccagttcctgggggccatgtacaccctgccccggcagcccacgccc
ggggtgcccccccagcaggctgccagcatgtga
DBGET
integrated database retrieval system
