Geospiza fortis (medium ground-finch): 102042417
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Entry
102042417 CDS
T03755
Symbol
PRDM6
Name
(RefSeq) PR/SET domain 6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00310
Lysine degradation
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102042417 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102042417 (PRDM6)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102042417 (PRDM6)
Enzymes [BR:
gfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
102042417 (PRDM6)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102042417 (PRDM6)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102042417 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
102042417
NCBI-ProteinID:
XP_014164609
UniProt:
A0A6I9ZAJ2
LinkDB
All DBs
Position
Un
AA seq
466 aa
AA seq
DB search
MSPSTRHEISETVPGQVGVGSSRRSAPGWAQRIPLGRAPVHRSPPPSGGGKCGDRGAARY
RCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGEPPPEIPEWLRDLPREVC
LCTSTVPGLAYGICAAQRIQQGTWIGPFQGILLLPEKVQAGAIRNTQHLWEIYDQDGTLQ
HFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACMDIPRGTELLVWYNDSYT
SFFGIPLQCIAQDENLNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSIVFPQTPCSRN
FSLLDKSGSIESGFNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQ
MHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIR
THTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccagcacacggcacgaaatatctgagacagtaccgggacaggtcggggtcggg
agctcccgacgctcggctccggggtgggcgcagcggatcccgctcgggagggcgccggtc
caccgctcccctccaccaagcggcggcggcaaatgcggcgaccgtggtgccgctcggtac
cgctgcacggccgaggagctggactactacctgtacgggcagcagcgcatggagatcatc
cccctgaaccagcacaccagcgaccccaacaaccgatgtgacatgtgtgctgataaccgg
aacggcgagcctccgcccgagatccccgagtggctccgggacctgccccgggaggtgtgc
ctgtgcaccagcaccgtgcctggcctggcctacggcatctgcgcagcacaacgcatccag
cagggcacctggatcgggcccttccagggaatcttgctcctgccagagaaggttcaagca
ggggccatcaggaacactcagcacctctgggaaatatatgaccaagatgggacactgcag
cactttatcgatggtggagaacccagtaagtcgagctggatgaggtacatccgatgtgcc
aggcactgtggggagcagaacttaaccgtggttcagtacaggtcaaatatattctaccgg
gcttgtatggatatccccaggggcactgagctgttagtgtggtacaatgacagctacaca
tctttctttggaatccctctccagtgcattgcacaagatgaaaatttgaatgtcccttcg
actgtaatggaggccatgtccagacaagacaccctacagccatttaataaaagtagcaaa
ctatcccctgccactccacagcgatccatagtatttccacagactccgtgtagcagaaat
ttttctctcctggataagtctgggtccatcgagtcaggatttaaccagatcagtgtcaaa
aaccaacgagttcttgcaagcccaacttcaacaagccaactaaattctgagttcagtgac
tggcatctttggaaatgtgggcaatgctttaagactttcacccagcggatcctcttacag
atgcatgtgtgtacgcagaaccctgacaggccctaccagtgtggtcactgctcgcagtcc
ttctcgcagccctcggagctgaggaaccacgtcgtgacgcactccagcgacaggcccttc
aagtgcggctactgcgggcgcgccttcgccggtgccacaacgctcaacaaccacatccgg
acacatacgggggaaaagcccttcaagtgcgagaggtgtgagaggagcttcacacaagcc
acccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataacagagagcaca
gaatcaattgaagtggattaa
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