KEGG   Geospiza fortis (medium ground-finch): 102043437
Entry
102043437         CDS       T03755                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like
  KO
K06752  MHC class II antigen
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04145  Phagosome
gfr04514  Cell adhesion molecules
gfr04672  Intestinal immune network for IgA production
gfr05164  Influenza A
gfr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102043437
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102043437
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102043437
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102043437
   05168 Herpes simplex virus 1 infection
    102043437
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gfr04147]
    102043437
Exosome [BR:gfr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102043437
  Exosomal proteins of epithelial cells
   102043437
  Exosomal proteins of breast milk
   102043437
SSDB
Motif
Pfam: MHC_II_beta C1-set MHC_I
Other DBs
NCBI-GeneID: 102043437
NCBI-ProteinID: XP_014166648
LinkDB
Position
Un
AA seq 298 aa
MGRGAAAGALLVALVVLGAPPAAGAELSGVFQEMVQSECHFINCTERVRFVKRFIYNREQ
YVHFDSDVGHFVGDTPYGEEVARYWNSDPEWMEHRRGAVDRHCRHNYELSTPFLMERRVP
PTVSISLVPPSSSQPGPGRLLCSVMDFYPAAIQVRWFQGQQELSEHVVATDVVPNGDWTY
QLRVLLETPPRRGLSYSCPVEHVSLEQPLSRHWEMPPDAARSKMLTGIGGFVLGLVFLAL
GLGFYVRKKWLITTQLQGFHIPAMARLAAATRSRQTKNISGIPSVSPEGHLQISFGVL
NT seq 897 nt   +upstreamnt  +downstreamnt
atggggcgaggggcggcagctggggccctgctggtggcactggtggtgctgggagcgccc
ccggccgcgggggcggagctctcaggagtgttccaggagatggttcagtccgagtgtcac
ttcattaactgcaccgagcgggtgaggtttgtgaagaggttcatctacaaccgggagcag
tacgtgcacttcgacagcgatgtggggcactttgtgggggacaccccgtatggcgaagag
gttgccaggtactggaacagcgacccggaatggatggagcacagacggggtgcggtggac
aggcactgccgacacaactacgagttgtccaccccgttcctcatggagcgccgagtgccc
cccaccgtgtccatctcactggtgcccccctcgagctcccagcccggccccggccgcctg
ctctgctccgtgatggatttctaccctgctgccatccaggtgaggtggttccagggccag
caggagctctcggagcacgtggtggccaccgacgtggttcccaacggggactggacctac
cagctgcgggtgctgctggaaacccccccacggcgcgggctgagctacagctgcccggtg
gagcacgtcagcctggagcagcccctgagccggcactgggagatgccgccggacgccgcc
cgcagcaagatgctgacgggcatcgggggcttcgtcttgggcttggtcttcctggcgctg
gggctcggcttctacgtgcgcaagaagtggctgatcaccacgcagctccagggattccac
atccccgccatggctcggctggcagcagccaccaggagtcgccagacaaagaacatctct
ggaatcccctcagtatcccccgaggggcatttgcagatcagctttggagttctataa

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