Geospiza fortis (medium ground-finch): 102044156
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Entry
102044156 CDS
T03755
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology and RUN domain containing M1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04140
Autophagy - animal
gfr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102044156 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102044156 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102044156 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102044156 (PLEKHM1)
Membrane trafficking [BR:
gfr04131
]
SNARE
SNARE associated proteins
Others
102044156 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
102044156 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PIRT
Prok-RING_1
PEP-CTERM
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
102044156
NCBI-ProteinID:
XP_014165836
UniProt:
A0A8N5EY80
LinkDB
All DBs
Position
Un
AA seq
1045 aa
AA seq
DB search
MHSSHPEDPKEAIQLIKKQLVTAIKALQKQYVSSDAVVTSDDGNANTLCSALEAVFVHGL
KAKHIKAESGGKGKKSGGRGPLPQPVFWGLLKSITHRNIVSELEQLMFINTDVGRCRAWL
RLALNDGLMECYLKLLLRDRARLHEYYQTPAVLLDAEECEFLLCYLQGLSSLTFELSYKS
AVLNEWTITPLSLSGLCPVSELLEPLTSSEPHRKESLGSISQSSGSDEIEIQAPVLPISK
ASSKIKLTSSSLSLNTTSSSQLSSSLGSDSLPAAPCARSPERAEEPLSCDSDLGTATAED
LDRSLQEVLSEFSKARPSPDAPEGRLLPSVLGCSPQPPPGPPAPPNRAQQEPPPSRDTSA
GTAAPRHGDRDGSSTSGAPAPREGLGRATSSGSEGSQAVRSPTAQQLLSPLPGCPKSWIS
EDDFYRPPPGESSRSIADTNGFGPEVDSEGPAPGLISALDLERLSVPSLDTGKPKMSPER
EQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLELRLFLDHEERIC
VETFSLLRCESLALSQDGRFELVFLGKKLFLRAPSQDXXXXXDRIREALHKCRPQLEEED
WETLECSEDGGEAQLIQGDSSALQQSDVPGSSLDWSAAPEAELDAIKEAVLYMDVDKTWV
PFIFSLSLETLKCFKIRNNDKILSNSYGIETIQDILPDTSLGGPSFFKVITSKAVLKLQA
ESAEEAASWRELVREVLMSYLEGAEEALTLGGSLDGHSQVVLKNIVKENGFLLQYLVAIP
MEKGLDAQSFICAGCSRQIGFSFARPKLCAFSGLYYCDSCHRDEESIIPSRLIHNWDLTK
RGVCKQALKFLTQIRNQPLIDLRLVNESLYEHVERMGRILRSREQLKLLGDYLIMCRSGA
LKELSKRLDHRHYLLECPHKYSVADLRQIAEGAFESFLQSLLQFASHHVYSCDLCTQRGF
ICQICNSSDIIFPFEFDTTTRCSECKTVFHRDCHARAPACPRCERRQRYQRQLEASTEPS
PEPGTYLDTALGAGMAGGTEQSPPA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagccaccccgaggaccccaaggaagccatccagctgatcaagaagcaactg
gtgactgccatcaaggctctgcagaagcaatacgtgagctcggacgctgtggtcaccagc
gatgacggcaacgccaacacgctctgcagtgccctggaggctgtgtttgtgcacggcctg
aaggcaaagcatatcaaggcagagagtggggggaaagggaagaaatcggggggtcgaggc
ccccttccccagccagtcttctggggcctgctgaagagcatcacgcatcggaatattgtc
tcagagctggagcagctgatgtttatcaacacggacgtggggcgctgccgggcctggctg
cggctggcactgaacgatggcctcatggagtgttacctgaagctgctgctgcgggaccgg
gcccgcctgcacgagtactaccaaaccccagccgtgctcctggatgctgaggagtgcgag
ttcctcctctgctatttgcagggtttatcctccttaacctttgagctctcctacaagtca
gcagttctgaacgagtggaccatcaccccactgtccctgtcaggcctgtgtcctgtgtcc
gagctgctggagcccctcacatcctctgaaccccataggaaggaatcactgggctccatc
tcccagtcctcggggtcggatgagatcgagatccaagcccctgtcctgcccatcagcaaa
gccagcagcaagatcaagctcacatcatcctcgctgagcctgaacaccacgagctcgtcg
cagctctcgtccagcctgggctccgacagcctccccgcggcgccgtgcgcccgcagcccc
gagcgcgccgaggagccgctgtcctgcgactctgacctgggcacagccaccgccgaggac
ctggacaggtccctgcaggaggtgctgtccgagttcagcaaggccaggcccagccccgat
gccccggagggacggctgctccccagcgtgctgggctgctccccccagccaccgccaggc
cctccagcaccacccaacagagcacagcaggagcctccccccagcagggacacctctgct
gggacagcagcccccaggcacggggacagagatggcagcagcacctccggagctccggcc
cctcgggagggtctgggcagagccaccagcagtggcagtgaggggagccaggctgtgcgc
agccccacggcccagcagctgctctctcccctgccagggtgtccgaagagctggatctca
gaagatgatttctacagacctcccccgggagagagcagcaggagcatagctgacaccaac
ggcttcgggccagaggtggacagcgaggggccagccccggggctcatcagtgctctggac
ttggagaggctctcagtgccatccttggacactgggaagcccaaaatgtccccagagcgg
gagcagaagggcttcagtgtggtgcaccgcaggcagatgggtctttccaaccctttccgc
gggctgctgaagctgggcagcctggagcggcgcggagccatgggcatttggaaggagttt
tcctgcgagctgtccccgctggagctgcggctcttcctggaccacgaggagaggatctgc
gtggagaccttctccctgctgcgctgtgagtccctggcactgagccaggacggccgtttt
gagctggtgttcctgggcaaaaagctcttcctcagagccccttcccaggacgnnnnnnnn
nncngggacaggatccgcgaggcactgcacaagtgccggccgcagctggaggaggaggac
tgggagactctggagtgttctgaggatggaggcgaagcccagctcatccagggagattcc
agtgctctccagcagagtgatgtgcctgggagcagcttggactggagtgcagctccagaa
gcagagctggatgccatcaaagaggctgttctgtacatggacgtggacaaaacctgggtc
ccgttcattttttccctgtctctagaaactctgaagtgctttaaaatcagaaacaatgac
aaaattttaagcaacagttacggcatagagaccatccaggacatccttccagacaccagc
ctggggggaccctccttcttcaaggtgatcacctccaaggctgtgctgaagctgcaggct
gagagcgcggaggaggcggcctcgtggcgggagctggtccgagaggtgctcatgtcctac
ctggagggtgctgaggaggcactcaccctggggggcagcttggatgggcactcccaggtg
gtcctgaagaacatcgtgaaggaaaatggcttcttgctgcagtacctggtggccatcccc
atggagaagggcctggacgcgcagagcttcatctgtgcaggctgctcccggcagatcggc
ttctccttcgccaggcccaagctctgcgccttctcggggctctactactgtgacagctgc
cacagggacgaggagagcatcatcccctcccgcctcatccacaactgggacctcaccaaa
cggggggtgtgcaagcaggccctgaagttcctgacccagatccgaaaccagcctctgatc
gacctgaggctggtcaacgagagcctctacgagcacgtggagaggatggggcggatcctg
cgcagccgggagcagctgaagctcctgggggattatctcatcatgtgccgcagcggcgcc
ctgaaggagctcagcaagcggcttgatcacaggcattacctcctggagtgtccccacaaa
tacagcgtggctgatctgaggcagatcgctgagggcgccttcgagagcttcctgcagtcg
ctgctgcagtttgcatcccaccacgtgtacagctgtgacctgtgcacccagcgaggcttc
atctgccagatctgcaacagcagtgacatcatcttccccttcgagttcgacactaccacc
aggtgcagtgaatgcaaaaccgtcttccaccgggactgccacgcccgggccccggcgtgc
ccgcgctgcgagcggcggcagcgctaccagcggcagctggaggccagcacagagcccagc
ccggagcccggcacttacctcgacactgccctgggagcgggcatggcgggagggacagag
cagagcccccctgcctga
DBGET
integrated database retrieval system
