Geospiza fortis (medium ground-finch): 102045472
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Entry
102045472 CDS
T03755
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain containing 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102045472 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102045472 (FYCO1)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102045472 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
102045472
NCBI-ProteinID:
XP_005423997
LinkDB
All DBs
Position
Un
AA seq
1538 aa
AA seq
DB search
MAATSGESQLQRIIRDLQDAVTELSKEFKEGGEPITDDSVNLQKFSYKLEYLLQFDQKEK
STLLGNRKDYWDYFCDCLAKIKGANDGIRFVKSITELRTSLGKGRAFIRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLNSKMSSDIVGQLYELTDVQFDLASRGYDLDAAWPAFAR
RTLSSLGSSAYLWKPPSRSSSMSSLVSNYLQAQEFPSSPDVNNSLNVEHLESYEEMRLEL
DQAELRQRELQDRIHQLEMENQELQAAVSLQKEQVQVEKEKSNNYSEENSRLTKMITELQ
KQCEVSHSTQSTVHDLQKCLQSLELSTAEQQKEHSTKVEQLLTSKEDYASKLQVSNQELE
TSRALIAVKDLCIDELKAKLSSTEQKNLNLLEKVDAALDEKGQQATAQYDSALQIRALLE
KLQEMEKAKADMQRLNTEHASQLKAAREELLLKEQAQKELESRYSSLTANSKEESEKLTG
SLETMAKEKNALQEALTLKGKEMAELQTQVMGSLAQVGSLEKNLEEARKEKEKLEEEYGR
REGALKQEVQSQAEQLQLQEGRLTKVSQTVCSLQEQNQKLMSEKEHLRQKVKELEEQMEQ
QNSAVSELDEESRKLKAENENLQQSKKKMEEKLKNLEASKASLEADVAKLRASEKQLQSE
IDDALVSVDEKEKKLRSENKQLDEDLQNARRQSHILEERLEALHSEYEELKQREETSKVS
YASLEAQLKSAKQHSLQMEKSLDTLKESKECLQSQLTQKEVELQGMESQCQQLRAEAERH
KKKAETLEVEKLSVEKTCLHQTKLIESLTSEKESVEKQQLQQAASLEKEAKELSFRLTMS
EEQLEVNRGEVSRLQAEVLDLRVKLQQATDERERMRGELAVTETVLSEQKTLVQQLKEQS
ESLNRNHVQELVECKEREEKLKKEQERTAHQKAELENNLMNLKEELSKVKRYLENARVEN
EENKDLLHRTNTDMAELGIQICALTSEKVDAEEQLAQATERFKELEEQAAEQQEKLKLDV
SNLREENKSLQEKLEEAQMCAAAVPSLQLQLETIKKQAQSFQETSQEELSAIKFQMSTEI
LNYQTKFKAVSEECGQVREQLEEQKRQQHAAEEEITELQAANTSLCRKLDEAREQLSESE
SARLQKEEEVTSLRELLERIQKEADEAKEKILDYTEKLSKVAADKDSSDQKLFAELDDLT
RTKQFLEERLIELIRDKDALWQKSDALEFQQKLSAEQRWQGDTEVNHCLDCQREFSWMVR
RHHCRMCGRIFCYYCCNNYMVTKLGGKKERCCRACFSKPRVIVDSTDDSGSSANQEGSPA
SLESPVSPAANEASKPPDDAAFDIITDEELCQVQESDSLHNESQMERDSLDQSVTDLNST
SSTFDESEDWQVAQDAEICLLKSGEIMMKLPLTVEEIMNFGESNRELFIKSSTYSIIPIT
VTEMGLTISWIFSSDPKSISFSVVYQEAEDTPLDQCKVLIPMTRCNSHKETIRGQVKVRN
AGIYTLIFDNTFSRFISKRVFYHLAVERPVIYDGSDFP
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacaagtggcgaaagccagctgcagcgaattatcagagacttgcaagatgca
gtgactgaattaagtaaagaatttaaagaaggaggtgaaccaatcacagacgacagtgtc
aacttgcaaaaattctcctacaagcttgagtacctcttacagtttgaccagaaagaaaaa
agcacattgctggggaacagaaaagactactgggattatttctgtgactgtctggcaaaa
atcaaaggagctaatgatggaatccgctttgtcaagtctattacggaactacgaacctct
cttggaaaaggaagagcatttattcgttattccctggttcaccaaaggctagcagacacc
ttgcagcaatgttttatgaacaccaaagtgaccagtgactggtactatgcaagaagtcca
tttctgaattccaaaatgagttctgacattgtgggtcaactctatgagctcactgatgtt
cagtttgacttggcatcaagaggctatgatttagatgctgcttggccagcatttgccagg
aggactctgtcctcacttggatcttcagcatatttatggaagcccccaagtcgcagttcc
agcatgagcagtttagtgagcaattatttgcaggcacaagagtttccttccagccctgat
gtaaataactcactaaatgttgaacaccttgagagctacgaagagatgcgtttagaactt
gaccaggctgaactgaggcagagggaacttcaagatcgtattcaccagctagaaatggaa
aaccaggagctccaggcagctgtcagccttcaaaaggaacaagtacaggtagaaaaggag
aagagcaataactacagtgaggagaactcccggctgacaaagatgatcacagagttacag
aagcagtgtgaggtctcacactccactcagagcactgtacatgacctgcagaagtgccta
cagtcactggaactgagtacagcggagcagcagaaggaacactcaacaaaggtggagcag
ctgttgaccagcaaggaagattatgcctcaaaattgcaggtttcaaatcaggagctggag
acctctagggctttgattgctgtgaaggatctttgcattgatgagctcaaagccaagctg
agttccacagaacagaagaacctcaacctccttgaaaaagttgatgctgccttggatgaa
aagggacagcaagccacagcccagtatgactctgccctacaaatacgggcactgttagaa
aagcttcaggagatggaaaaggcaaaggcagatatgcaaagactcaatactgaacatgca
tctcagctgaaagcagcaagggaggagctgctgctgaaagaacaggcacagaaggaactg
gaatccagatacagtagcctcactgctaactccaaagaagagagtgaaaagctgactggg
agcctggagaccatggcaaaggaaaagaatgcacttcaggaggccctgactctgaaagga
aaggagatggctgagctccagacccaggtaatggggtcgctggctcaggtgggttcactg
gaaaaaaatcttgaggaagccaggaaggaaaaagagaaacttgaggaggagtatggtagg
agagaaggagcactgaagcaggaagtccagtcacaagcagagcaacttcaactacaggag
ggtcgcttaacaaaggtgagtcagactgtgtgtagccttcaggagcaaaaccagaaactc
atgtctgaaaaggagcatctcaggcagaaagtcaaggagctggaggagcagatggagcag
caaaactctgcagtgagtgaattggatgaggagagcaggaaactgaaagcagagaatgag
aatttgcagcagtctaagaagaagatggaagagaagctgaaaaatctggaagcttctaaa
gcttccctagaagccgatgtagccaagttgagagcctctgagaaacaacttcagagtgag
atagatgatgccctggtgtcagttgatgaaaaagagaagaagctccggagtgagaacaaa
cagctggatgaagacttgcagaatgccaggaggcaaagccacattctagaggagaggctg
gaggctctgcactcagaatatgaagaactaaagcaaagagaagagacctccaaggtgtct
tatgcctcacttgaagcacagctgaagagtgccaaacagcatagtttacaaatggaaaaa
agcttggacaccttgaaggaaagcaaagagtgtctccagtcacagctcacacagaaggaa
gtagaactgcagggcatggagagccaatgtcagcagctaagagcagaagctgaaagacac
aagaagaaagcagagactcttgaggtagaaaagctcagtgttgaaaagacatgccttcat
cagacaaaacttatagaatctctcacatcagaaaaggaatcagtggaaaaacagcaacta
cagcaggcagcgtccctggagaaggaggcaaaagagttgtccttcagactgaccatgagt
gaagagcagctggaggtcaacagaggtgaagtgtccaggctgcaggcagaagtcctggat
ctgcgagtcaagcttcagcaggccactgatgagagagagaggatgagaggtgagctggca
gtcactgagactgtcctgagtgagcagaagacacttgtccagcagctgaaagagcagagt
gagtctctcaacagaaatcacgtgcaagaactggtggaatgtaaagaaagggaagaaaag
ctgaaaaaagagcaggagagaacagcccatcaaaaagctgagctggaaaataatttgatg
aacctaaaggaagagctgtctaaggttaagcggtatttggaaaatgctagagtggaaaat
gaagaaaataaagatctcctccacaggaccaacactgatatggctgaacttggcattcag
atttgtgccttgacctctgaaaaagtggatgcagaagagcagttggcccaggccacagaa
aggttcaaagaactggaagaacaggcagcagagcaacaggagaagctgaagcttgatgtc
tctaatctcagagaggaaaacaagagcctgcaagagaaattagaggaggctcaaatgtgt
gctgcagctgtcccaagtctgcaattgcagctggagacaataaagaaacaggcacagagt
ttccaagagaccagccaagaagagctgtctgcaataaaatttcaaatgagcacagagatt
ctaaattatcagacaaaattcaaggctgtcagtgaggagtgtgggcaagtaagagagcag
cttgaggagcagaagcgacaacagcatgcagcggaggaagagattacagagttacaagct
gcaaacacgagtttgtgtagaaaactggatgaagcaagagagcaactgtcagaatcagaa
tctgctcgtctgcagaaggaagaagaagtgacttctcttagagaactcttggaaaggatc
caaaaagaagctgatgaagcaaaagagaagatcctggattacactgagaagctcagcaag
gtggcagcagataaagatagcagtgaccagaagttatttgctgagctggatgacctgaca
agaacaaagcagttccttgaagaacgtttgatagaacttatcagagataaggatgctttg
tggcaaaagtctgatgctctggagttccagcagaagcttagtgcagagcagaggtggcag
ggggacacagaagttaatcactgtctggactgccagagagagttctcatggatggtgcgc
cgacaccactgcagaatgtgtggccgcattttctgctactactgctgcaacaactacatg
gtgacaaagcttggtggaaaaaaggagcgttgctgcagagcttgctttagtaagcctaga
gtcattgtggacagtacagatgactctggatccagtgccaaccaggaaggatcaccagct
tcactggaatcgcctgtgtcaccagctgcaaacgaagcctctaaaccaccagatgatgca
gcttttgatataatcactgatgaggagctgtgccaagtacaggaatcagactctctccac
aatgaaagtcagatggaaagagactctctggatcaaagtgtgacagatctaaacagcact
tcttcaactttcgatgaatctgaagactggcaagttgctcaagatgctgagatatgcttg
ctgaagtcaggagaaattatgatgaaattaccccttacagtagaagagatcatgaatttt
ggagaaagcaacagagagctgttcatcaaatccagcacctacagtatcattcccatcact
gttacagagatgggactaacaatcagctggatcttctcatcagaccccaaaagcatatcc
ttcagtgttgtctaccaagaggccgaagacacgccgctggatcagtgcaaagttcttatc
cctatgactcgctgcaactctcataaggaaactatcagaggacaggtgaaagtcagaaac
gctggaatctacaccctgatatttgacaacacattctctaggtttatctcaaaaagagtg
ttttatcacttggctgttgagcgacctgtcatctatgatggaagtgattttccatag
DBGET
integrated database retrieval system
