Gallus gallus (chicken): 100859816
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Entry
100859816 CDS
T01006
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga00310
Lysine degradation
gga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100859816 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
100859816 (SETDB1)
Enzymes [BR:
gga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100859816 (SETDB1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100859816 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100859816 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
DUF4537
Motif
Other DBs
NCBI-GeneID:
100859816
NCBI-ProteinID:
XP_015135533
CGNC:
63339
Ensembl:
ENSGALG00000024051
LinkDB
All DBs
Position
25:195669..210959
Genome browser
AA seq
1312 aa
AA seq
DB search
MRGATPASSRRIGTSSGCRKWRHAASGLTPPAPSSASIPAVGVGAGPWGRAEMDSQDIKE
LQQEVMEEMGISMEELQDIINEELEKSEYVKQKKQQLEELEKYVKQKEEEVAHVDRLFDD
AWRDFDKCEMLVKDLYSKLGLEYRESSSEEEDLAAKPTEVIEIPDDDDDDVMSIDLGWKN
SDTSPKVAKDQTLLREAMAAMRRSAQDVQKFMDAVHRRTNAQDALKDAQTPQQAPGAPQS
SGPAVGVGDLSNDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKFDNKGKSLL
SGNHIAYDYHPSPDKHYVGSRVVAKYKDGDQVWLYAGIVAETPNVKNKDRFLIFFDDGYA
SYVKEWELYPVCRPLKKTWEDIEDVSCRDFIEEYISAYPNRPMVLLKNGQLIKTEWEGTW
WKSRVEEVDSSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPN
VGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAAQPSSPQPTEMECSDSLLAQSRKQ
VAKKSTSFRPGSGQSSPSPPVLSDAPPAGRAAAAQQHRFPGGPAQPFHGMMDRVPNEPSY
RAPLEKLFYLPHVCSYACLSRVRPMRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFH
VIYKTPCGLCLRSMAEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITK
GREDVPLSCVNEIDSTPPPQVAYSKERIPGKGVFINTGWEFLVGCDCRDGCRDRSKCACH
QLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNVNMCTNRLVQHGLQVR
LQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVE
NFKEGYESDAKCSSDSSGVDLKDDEEDNTGTEEQEESNEDSSDDNFCKDEGFNTSSVWRS
YATRRQTRGQKENGLSETASKDSGLTQQVGHDEAAAAASCKLPVSEETSKNKVASWLSSN
SVSDSFQDNDSTSSFKMSEGGEAKGCRADSAPGGADGEAKAPRKDEPEDPSKVPGLSDLG
RMYGYNPSPPKLEGVRRPTSKTALLQSRRHSGPLQPPAEDVLTLSSSTDSDGDNGPKAEG
QPQGTANDSDDIQTISSGSEEEEGDEKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKS
TNMAAAEKGDSAPVCRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDT
HDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcgcaacgccggcctcaagtcggaggattgggacttcctctggctgccggaag
tggcgacatgcggcttccggtctgacgcccccggccccttcctcagcctccatcccggct
gtaggggtcggggctgggccgtggggccgagcagaaatggattcccaggacatcaaagag
ctgcaacaagaagtgatggaggagatgggaatctccatggaggagctgcaggacatcatc
aacgaggagctggagaagtctgagtacgtgaagcagaagaagcagcagctggaggagctg
gagaagtacgtgaaacagaaggaggaagaggtggctcacgttgaccgtctctttgatgat
gcttggagagactttgataaatgtgagatgttggtaaaggatctgtactccaagctgggc
ctcgagtaccgtgagagcagctctgaggaggaggacttggctgccaaacccacagaagtg
attgagatcccggatgacgacgacgacgacgtcatgagtatcgatttgggatggaagaac
agtgataccagtcccaaagtcgccaaggatcagactctgctgcgggaagccatggcagca
atgagaaggtctgcccaggatgttcagaaatttatggatgctgtgcacaggagaacgaac
gcccaggatgcactgaaagatgcacaaacccctcagcaagctcctggtgctccccagtct
tctggacctgctgtgggtgtgggtgatctcagcaacgatggcgatctgaaggttggcatg
aggatcctgggcaagaagagaaccaaaacgtggcacaaaggaactctgattgccatccag
acagtcggtgctggtaagaagtacaaagtgaagtttgacaataaggggaagagtttgctt
tctggcaatcacattgcttacgactaccacccctccccagacaaacactacgttgggagc
agagttgtggcaaaatacaaagatggggatcaagtttggctgtatgctggcatagtggcc
gaaaccccaaacgtgaagaacaaagacaggttcttgatcttctttgatgatggctacgct
tcgtacgtcaaggagtgggagctgtacccggtctgcaggccgcttaagaagacgtgggag
gacatagaggacgtgtcgtgccgggacttcattgaggagtacatcagtgcataccccaac
cgtcccatggtgctgctgaagaatggccagctgatcaaaaccgagtgggaggggacctgg
tggaaatccagggtggaagaagtggacagcagtctggtcaaaatcctcttcctggatgac
aaacgctgtgagtggatttaccggggatccacgcgcctcgagcccatgttcagcatgaaa
acctccactgcctctacccaggaaaagaagcagagtgggcaggcgaggactcggcccaac
gtcggcgccgtgcggagcaaaggccccgtggtccagtacacacaggatctgaccggagct
ggaacgcagtacaaacccctggagcagatgcaggcggcctccctggcagcacagccctct
tctccgcagcccaccgagatggagtgctctgacagtctgctggcccagtcgaggaagcag
gtggccaagaagagcacatccttccgtcccggctcggggcagtcgtcgccttcaccgcct
gtgctgagcgatgcacctccggcaggaagggcagctgcagcccagcagcatcgcttcccc
ggcgggccggcgcagcccttccacggcatgatggaccgcgtgcccaacgagccgtcgtac
cgcgcgccgctggagaagctcttctacctcccccacgtctgcagctacgcctgcctgtcc
cgcgtgcggcccatgcgcagcgaccagtaccgcagcaagaaccctctgctcatccctctg
ctctacgacttcaggaggatgacggcccgccggagggtgaaccgcaagatgggcttccac
gtcatctacaagacgccgtgcgggctctgcctgcgcagcatggccgagatcgagcgctac
ctcttcgagaccgactgcgacttcctcttcctggagatgttctgcctggatccctatgtc
ctggtggaccgcaagttccagccctacaaaccctactattacatcgccgacatcaccaag
ggccgcgaggacgtgccgctgtcctgcgtcaacgagatcgacagcacgccgccgccgcag
gtggcctacagcaaggagcgcatccccggcaagggggtcttcatcaacaccgggtgggag
ttcctcgtgggctgcgactgcagggacggctgcagggacaggtcgaagtgtgcctgtcac
cagctgacggtccaagcgaccggctgcaccccgggagggcagatcaaccccaactcgggg
taccagcacaagaggctggaggagtgcctcccaactggggtttatgagtgcaacaagagg
tgcaaatgcaacgtcaacatgtgcaccaaccgcctggtccagcacgggctgcaggtccgg
ctgcagctgttcaagactcagaataagggctggggcatccgctgcctcgatgacatcgcc
aagggctccttcgtctgcatctacgcagggaaaatcctcacggatgactttgccgacaag
gaaggcctggagatgggggacgaatactttgcaaacctggaccacatcgagagcgtggag
aacttcaaggagggctacgagagcgacgccaagtgctcatctgacagcagcggggtggac
ctgaaggacgacgaggaggacaacacgggcacggaggagcaggaggagtccaacgaggac
agctccgacgacaacttctgcaaggatgagggcttcaacaccagctcggtgtggcgcagc
tacgccacgcggcgccaaacccgcggccagaaggagaacgggctctcagagacggcctcc
aaggactcggggctcacccagcaggtcggccacgatgaggccgcggccgccgcctcctgc
aagctgcccgtgagcgaggagacctccaagaacaaagtggcctcgtggctcagctccaac
agcgtgtctgacagcttccaggacaacgacagcacctcgtccttcaagatgagcgaagga
ggggaggccaaaggctgcagggccgattctgccccggggggagcggacggagaggcgaag
gcgccgaggaaggatgagcctgaagatccgagcaaggttcccgggctgagcgacctgggc
aggatgtatggctacaaccccagcccccccaaactggaaggggtgcgcagacccaccagc
aaaacagcgctgctgcagagcaggcgccactcgggccccctgcagccccccgccgaggac
gtgctgaccctgtccagcagcaccgacagcgatggggacaacgggcccaaggcagagggg
cagccccagggcactgccaacgacagcgacgacatccagaccatctcatcgggctccgag
gaggaggaaggggacgagaagaagaacccctctggttcagggcccgtgaagaggcaggtg
gcggtgaaatccacgcgggggtttgccctgaagtccacccacggcatcgccatcaaatcc
accaacatggcagcagccgagaagggcgacagcgctcccgtgtgcaggaccacgcggcag
ttctacgacggggaggagtcctgctatatcatcgacgccaaactggaggggaacctgggc
cgctacctcaaccacagctgcagccccaacctcttcgtgcagaacgtctttgtggacaca
cacgacctccgcttcccatgggtcgccttctttgccagcaagaggatccgagcggggacg
gagctgacgtgggattacaactacgaggtgggcagcgtggagggcaaagagctgctgtgc
tgctgcggggccatcgagtgcagagggcggctgctgtga
DBGET
integrated database retrieval system
