Gallus gallus (chicken): 101750600
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Entry
101750600 CDS
T01006
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101750600 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
101750600 (SMG6)
03032 DNA replication proteins [BR:
gga03032
]
101750600 (SMG6)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101750600 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
101750600 (SMG6)
DNA replication proteins [BR:
gga03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
101750600 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
101750600
NCBI-ProteinID:
XP_004946604
CGNC:
70047
Ensembl:
ENSGALG00000003108
UniProt:
A0A8V1AI38
LinkDB
All DBs
Position
19:complement(5673804..5764759)
Genome browser
AA seq
1425 aa
AA seq
DB search
MAEGLERVRVSAAELRDMVAAQARAGAAGGAENMKEVKEPRHRKDNRRPDLEIYKPGLSR
LRSKLVPPKHEASEKERSGAEEGKGESGPSGGGSFRRRASSHGELQHGDSLNQNGPSLGN
KEAETKGGLQSQEDSCTPLAVDECCAKTTRRAKKPDQQIYQPGKRLHLVPKELAVRLATE
EITSKVEQLRVEGGEETEKGTAEDNNRKTKSSKEDREGSQAGDGVKASRADKGRRLERSD
RMRRAHDEVMQGKLGATKRYSRSDKRRSRYRTCSTSSAGSNNSVDGIPLVDGMERRQERA
RMRPRKQLSASSTDSLDDDRIDEAEAYASNRVSDRKKRSEQNRASRSESEWSSNGREVKG
HFRVTFDSKTMNRDIILADTDKKNTLKAFSSCNDSETLEARSQSREPQGRGRGILFLPAN
TDLSASAVGSPEPSHPGPRLLLGGAGSKGSRSRGRGGTARRLWDPNNPDQKPALKSQTPQ
LHFLDTDDEVSPTSWAEARQAQTSYYKFQNSDNPYYYPRAAGQGPQYPYGGYSLQYPMGP
SNGVYPGAFYPGYPGQAGQYMCGPLTPAPLSPEMEQQMRNMQQQELSKLLREAGNQEQQL
SNLLSRDRISPEGLEKMAQLRVEMLQLYERCILMDIEFSDTQNVDQLLWKNAFYQVIEKF
RQLLKDPLGENAQEIRNKLLQLLDEGTSFFDGLLQKLQVSYQFKVEDYMDGMAIRCKPLR
KMVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQQIAPKNGRPYNQLALL
AIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQKKHQVLELSPSHR
GKGKKSTLRQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDNGLGNLSPSDLNKRFILS
FLHAHGKLFTRIGMETFPAVAEEVLREFQVLLQHSPPPIGSTRMLQLVAINMFAVYNSQP
KECISEDCRSVIQEQATALGLSMFALLVRRCTNLLRECVQVQPQEEEQEDEEDDIKVSAL
PQDLKELLPSVKVWSDWMLGHPDTWNPPPTSLELPKQVSVDVWATLADFCNILTAVNQSE
VPLYKDPDDDLALLSLEEDRLLSGFVPLLVAPQEPCYVERTSDKVIAADCKRVTVLKYFL
EALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQKEDDVRIEAFEDDSEAE
GSGGEMDIKELRAKKQALARKVAEQQRRQDKIQAVLKDQSQMRQMELEIRPVFLVPDTNG
FIDHLSSLITLLDCRKFILVVPLIVINELDGLAKGPEMEHRAAGYARQVQERARKSIEFL
EERFEGRDNCLRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPS
NKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggctggagcgcgtccgcgtctcggccgcagagctgcgggacatggtagcc
gcgcaggcccgtgccggggcggcaggaggagcagaaaacatgaaggaggtgaaggagcca
cggcatcgcaaagacaacaggcgtccagatctggagatttacaagcctggcctctcccga
ctgaggagcaaacttgtgccaccaaagcacgaggcttctgagaaggagaggagcggagct
gaggaaggcaagggggaaagtggcccttcaggaggaggatccttcaggagaagggcctcc
agtcatggagaacttcagcatggtgacagcctcaaccagaacggtccttcactgggaaac
aaagaggcagagactaaaggtggtcttcagagccaggaggactcgtgcacgccgcttgct
gtggatgaatgttgtgccaagaccacaaggagagccaagaaaccagaccagcagatctat
cagccagggaagcgcctgcatttggttcctaaagaacttgccgtacggctggctactgag
gaaatcacctctaaagtggaacagctgagagttgaaggaggtgaagagactgagaaaggt
actgcagaagataacaataggaaaaccaagtcaagcaaagaggatagagagggaagccag
gcaggggacggagtgaaagcctctagggcagataaaggaagacgactagagcgaagtgac
aggatgaggagggcacacgatgaggtgatgcaggggaagctgggcgctacaaagcggtac
tcccgctctgacaagcggcggagccgataccgcacgtgcagcacgagctcagctggaagc
aacaacagtgtagatggaatcccgctggtggatgggatggagagacggcaggagcgtgct
agaatgcgtcctaggaagcagctctctgcatcctccactgactccttggatgatgacaga
attgatgaggcagaagcatatgcctccaacagggtttcagataggaaaaagcgttcagag
cagaatcgagcttctaggagtgaaagtgagtggagcagcaacggcagagaagtcaaggga
cacttccgagtcacttttgacagcaagactatgaacagagatatcattctagcagacaca
gataaaaaaaataccctgaaggcgttttctagttgcaatgactcagagactttggaggca
aggagccagagcagagagccccaggggaggggccgtgggattctgttcctgcctgccaac
acagacctctctgccagcgctgtgggctcccctgaacccagtcaccccgggccccggctg
ctgctcggtggtgctggcagtaagggctcccgaagccggggccgaggtggcaccgctcgc
aggttgtgggaccccaacaacccggaccaaaaacctgccctgaagagccaaaccccacag
cttcacttcctagacacggacgatgaagtgagtcctacctcctgggcggaagcccgccag
gcccagacgtcctattacaagttccaaaactctgacaacccctactattaccctcgggct
gctggccaaggtccgcagtatccttacggtgggtactccctgcagtatccaatgggtcca
agcaatggcgtgtacccaggagccttttaccccgggtaccctggccaggcagggcagtac
atgtgcggcccactcaccccagctcctctgagtcctgagatggagcagcagatgcggaac
atgcagcagcaggagctcagcaaactcctccgtgaggctgggaaccaggagcagcagctc
agcaatctgctttccagagaccgcatcagcccagaggggctggagaagatggcccagctg
agagtggagatgctgcagctgtacgagcggtgcattttgatggatatcgagttctctgat
acccagaatgtggaccagctgctgtggaagaacgccttctaccaagtgattgagaaattc
cggcagctcctcaaggaccctctgggggaaaatgcccaagaaattcggaacaaacttctc
caacttctggatgagggcacttccttttttgatggcttactccagaagctgcaggtgtcg
taccagttcaaggtggaggactatatggatgggatggccatccgctgtaagcctctgcgg
aaaatggtgaagtacgcactgatcagtgcccagaggtgtatgatttgtcaaggggacatt
tgccgatacagagaacaagcaaatgacactgcaaactatggaaaggcacgcagctggtac
ctgaaggctcaacaaattgctcccaaaaacggccgcccatacaaccagctggcactcctg
gccatctacacgaggagaaagctggatgctgtctactactacatgcgcagtctggcagct
agtaaccccatcctcacagccaaggagagcctcatgagcctgtttgaagagacaaaacgc
aaggcagagcaaatggagcagaagaagcaccaggtgctggagctgagccccagccatcga
gggaagggcaagaagtccacgttgcgacaagttggagatgatgccacacggctggagatc
tggattcatccttcccacccccgctcctctcagggccacgagtccggcagagattctgag
caggacaatggtcttgggaacctcagccccagcgatctgaacaaaaggttcatcctcagt
tttctccatgcccatgggaagctgtttaccaggattgggatggagacgttccctgcggtg
gctgaggaggtcctgagggagttccaggtcctgctgcagcacagcccccctcccatcgga
agcacccgcatgctccagctcgtggcaatcaacatgtttgcagtgtacaactcccagccc
aaagagtgcatctccgaggactgccgctccgtcatccaggaacaggccacggccctgggg
ctctccatgtttgcactcctggtgaggaggtgcaccaatctgctgagagaatgcgtgcaa
gttcagccacaagaggaggagcaggaggatgaggaggatgacatcaaggtctctgccttg
ccccaggacctgaaggagctgctccccagtgtgaaggtctggtcggactggatgcttggc
cacccggacacctggaatcctccaccaacctccctcgagctccccaaacaggtctcagta
gatgtgtgggcgacgctggctgacttctgtaacatactgaccgcagtgaatcagtcggag
gtgcccttgtacaaggacccagatgacgaccttgccctgctcagcctggaagaggatcgg
ctgctctcgggcttcgttcccctgctggtcgccccccaggagccctgctacgtggagagg
acctcggacaaggttattgcagccgactgcaagagggtcacagttctgaagtatttcctg
gaagccctttgtggacaagaagagcctttgctggcattcaagggtggaaaatatgtgtca
gtggcacccgtcccagacgccatgggaaaggaaatgggaagccaagagggaaaacaactg
gaagatcagaaggaagatgatgtgaggattgaggcatttgaagatgactcagaggctgaa
ggcagcggaggagagatggacatcaaggaactccgagccaagaagcaagcgctggccagg
aaggtggcagagcagcagcgtcggcaggacaagattcaggccgtgctgaaagaccagagt
caaatgaggcagatggagctggagataagacctgtcttcctggtcccggacaccaacggc
ttcatcgaccacctcagcagcttgataacgctgctggactgcaggaagttcatcctggtg
gtgcccctgatcgtgataaacgagctggatggcctggccaaaggcccggagatggagcac
cgggctgcaggctatgcccgccaagtgcaggagagagccaggaagtccatcgagttcctg
gaggagaggtttgagggccgtgacaactgcctgagggctctgaccagccgaggcaacgag
ctggagtccatctccttccgcagtgaagacaccactggccagcagggaaacaacgacgac
ctgattctgtcctgctgcctccactactgcaacgacaaggccaaggatttcatgccctct
aacaaagacgatcccatccggctgctccgcgaggtggttctgctgacggacgaccgcaac
ctgcgagtcaaagcgctgacccgcaacgtgcccgtgagggacatccccaccttcctcaaa
tgggcccaggagggctga
DBGET
integrated database retrieval system
