Gallus gallus (chicken): 373983
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Entry
373983 CDS
T01006
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03440
Homologous recombination
gga03460
Fanconi anemia pathway
gga04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
373983 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
373983 (BRCA1)
03460 Fanconi anemia pathway
373983 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gga01009
]
373983 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gga04121
]
373983 (BRCA1)
03036 Chromosome and associated proteins [BR:
gga03036
]
373983 (BRCA1)
03400 DNA repair and recombination proteins [BR:
gga03400
]
373983 (BRCA1)
Enzymes [BR:
gga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
373983 (BRCA1)
Protein phosphatases and associated proteins [BR:
gga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
373983 (BRCA1)
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
373983 (BRCA1)
Multi subunit type E3
BRCC complex
373983 (BRCA1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
373983 (BRCA1)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
373983 (BRCA1)
BRCA1-A complex
373983 (BRCA1)
BRCA1-B complex
373983 (BRCA1)
BRCA1-C complex
373983 (BRCA1)
BRCA complex
373983 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
373983 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
BRCT_2
zf-RING_2
zf-C3HC4_3
BRCT_3
zf-Nse
zf-RING_6
RING_XB3-XBAT31
zf-RING_5
zf-RING_10
zf-MIZ
zf-ANAPC11
RTT107_BRCT_5
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
373983
NCBI-ProteinID:
NP_989500
CGNC:
2006
Ensembl:
ENSGALG00000002781
UniProt:
Q90Z51
LinkDB
All DBs
Position
27:complement(7969221..7990488)
Genome browser
AA seq
1749 aa
AA seq
DB search
MDLSVIAIGDVQNVLSAMQKNLECPVCLDVIKEPVSTKCDHVFCRFCMFKLLSRKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLLEAISAFELDTGVKFLSSRYFPKTSTEVATAEL
LGNNSSVIQSKGFRNRKRGAKENRQDSCTLEANVDPQLTDNRVKGSSVRSKKQKCGIEKG
VLIELGTDSSEEHFILASSTGLEDKEELEEPKSAEKYGSSCNTQPLKLGAKEIILPNVIG
ETDFLKEALDKKSMLNITEHIKCNQVNTIEGQSSPLNVFDADLLTGQRDGIGNASPLKND
TSFLKNAEEMDVEETQCSHKNQELDLEDSSEGRLDKIKEKDICVPSVEDVEMCEPMDDSL
LEKEPPVEKPLQPKIPHCPTLNEVSTKGLNQSIQKVNEWFSKSSRILSSSSSQNDHAEAT
DASGEGDISLSDKDSCISEKTNPIVDSVEFAVIERNKRWTKQTTYSIEDKIFGKTYERGR
KSNPSTILRDILPATKKEDAAAEEGCLNNSRKDRLKRKRKSACILQPEDFIKKKDLEEAD
RCPQGIKSSLGDAEKEKCDENSAVKENPLLEKRKGSTLAEFKERGLQWKNAAEKVSGKCS
DGQLELNNSDQKSTKNACSTAKGCRHSTRTRCAIHLVDRNPGSFDLAEPLINSYPSNEEP
SKADCERRQVRRSRRLQLLSEEITKETGKMRVIKEAKNSDSGPEGSVFGVERNVLVHNSQ
CKDLRKQQDILSYMSLADRNGADLEANGIQISSKNSDDMAKNRSFFNPTFSCQLSNFNSP
SSKAGSQEGEMLGKLFLPQSPSKTVLHAASILTEEKRSWSCTVFSQDKGCCSRNVPKDFR
IGKSPMAKNASEFTMEAEDSELDMQYLRNIFRSSKRQSFSLYPTPMKACTTDDVASEKLN
TSCPDQVEERNSKYLKTENLQEEKTTAENLSSVCEKFETCESACVSPVSCFVSSAACVHT
VENQDVSKVANHGNLTTLLRICAARNEDGNRPQKGEQGSEKTLSTGIGVESKLRLSPVRS
NRSQSDQSNTEEHAFQRTGLNAVSETYFSSESNQVEKAEVVDDKGLMQHFQPSPMLCPTA
CQQNPAEFNCELTEKKIITRERSLVKGNEERVIQTVSTGLSEFSVREALEESLKGHSDFT
DLSETPDGLLCSDNDTEESASFYVTNRKDTSAVFVKRSGAAWVKEVNDSVVSCKPRSEGI
QRFRRRAQKLQSSDEESSDDEDLPSFQELMFGKSVSTPLQIQKQVTSVVQSSANPSTLPC
SECLNENNEQKTLEAALSNECASPSQESECSVNLFSSQSNMSEESVDGAQELKKTLTQVS
NVKKSKEAPQSCSGGLKRLKNNLNDEYQEDPNMGANLGEASGYDSETSRVEDSHEPFSQG
EILSTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDAEVLPLCRELPYCSIGGTLGLERM
RQETENVSEHDSETKLTKASVLPVLCGNVTKNPNSSSFSVKHPCPQTAEATDSSAVAQGD
NKSNVQVCKSKRSVCFPTSVLHNVAGKENAASSGTTCRTEMSIVASGLNQSEHLMVQKFA
RKTQSTFSNHITDGTTHVIMKTDEELVCERTLKYFLGIAGRKWVVSYQWIIQSFKEGRIL
DEEHFEVKGDVINGRNHQGPKRARQSPAEKIFKDFEICCCGPFTDMTTGHLEWIVELCGA
SVVKQLHLFTHKVNSTAVVVVQPDAWMEGTSYEAIQRKNNVAVVTREWVLDSVACFECQE
LDAYLVSQD
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcagtgattgccattggagacgtgcaaaatgtgctttcagccatgcagaag
aacttggagtgtccagtctgtttagatgtgataaaagagccggtttcaacaaaatgtgat
cacgtattctgcagattctgtatgtttaaacttctcagcagaaagaaaaaaggtgtaata
cagtgccctctgtgtaagactgaagttaccaagagaagtctcaaagaaaattccagattt
aagcagctaattgaaggattgttggaagctatcagtgcgtttgagcttgatactggagta
aaatttttaagcagtcgttattttcctaaaacatccacagaagttgctactgctgagctc
ctgggtaataacagttctgtcatccagagtaagggtttcagaaacaggaaaagaggcgct
aaagaaaatagacaagacagctgtaccttggaagctaatgtggatccacagcttacagac
aacagggtcaaagggtcttctgtaagaagtaaaaaacagaaatgtggcattgaaaaaggt
gtacttatagagcttggcactgattcatctgaggagcattttatactggcaagcagtact
gggttagaagacaaagaagagctagaagaacctaagagtgctgagaagtatggaagttct
tgcaatacacagccactcaagctaggtgctaaagaaataattttaccaaatgtcataggt
gaaactgatttcttgaaggaagctttggacaagaaaagcatgctgaacatcactgaacac
atcaaatgtaaccaagtaaatacaattgagggccagagttctcctttaaatgtttttgat
gcggacctactcacagggcagcgtgatggaataggtaatgccagtcccttaaagaatgac
acatctttcttgaagaatgcagaagaaatggatgtggaggaaactcagtgcagtcataaa
aaccaagagcttgacttagaagatagctcagaaggtagactggataaaataaaagaaaag
gatatttgtgtgccaagtgtggaagatgtagaaatgtgtgaacccatggatgattctcta
cttgaaaaagaacctcctgtggagaaaccacttcagccaaagatacctcattgtcctacc
ctgaatgaggtctctactaagggactgaatcaaagcattcagaaagtcaatgagtggttt
tcaaaaagcagtaggattttatcttccagttcatcccagaatgatcatgctgaagcaact
gatgcttcaggtgaaggagatatttctctatcagataaagattcgtgcatttcagagaag
accaaccctatagtagattctgtggaatttgcagtgattgaaagaaacaagagatggaca
aagcaaacaacatatagtatcgaagacaaaatatttgggaaaacatatgagagagggagg
aaatcaaatccctctactatcttgagagacattttgcctgctacaaaaaaagaagatgca
gctgctgaagaggggtgcttgaataattccagaaaagaccgactaaaacgaaaaaggaag
tctgcctgtatccttcagcctgaagacttcattaagaagaaagatctagaagaggcagat
agatgcccccagggcattaagtccagtcttggagatgctgagaaggaaaaatgcgatgaa
aattctgctgttaaggagaatcccctccttgaaaaaagaaagggtagtacactagcagaa
ttcaaggagagaggattacagtggaaaaatgctgctgaaaaggtgtcaggcaagtgctct
gatggacagctggaactgaataattctgatcagaagagcactaagaatgcatgttctaca
gcaaaaggatgcagacattcaactagaaccaggtgtgctatacacttagttgatagaaac
ccaggttcctttgatctagctgagccactcattaatagctatccaagcaatgaagagcca
agcaaagccgattgtgagcgaagacaagtcagacgcagcaggaggcttcagctactttct
gaagaaattacaaaagaaacaggaaaaatgagagtaattaaggaagcaaaaaattctgac
agtggtccagaagggtctgtctttggagttgaaaggaatgtgttagttcacaattcccag
tgcaaagacctgaggaagcagcaggatatattgagttacatgtcactcgctgatcggaat
ggtgctgatctggaagcaaatggaatacagattagttcaaagaattcagatgatatggca
aaaaacagaagtttcttcaatcctacattttcttgtcaactttcaaattttaattcccct
tcatccaaagcaggttctcaagaaggtgaaatgctaggtaaacttttcctcccacagtct
ccttcaaagactgtgctgcacgctgcttccatcctgactgaagagaagaggtcttggtca
tgtactgttttttcccaggacaaaggatgctgttcacggaatgttcccaaggacttcaga
attggaaagtcaccaatggctaaaaacgcttcagaatttaccatggaagctgaagacagt
gagttagacatgcagtatctgagaaatatatttaggagttcaaaacggcagtcttttagt
ctttatcctactcccatgaaggcatgtaccacagatgatgttgcatctgaaaaattaaat
acttcatgtcctgatcaggtagaagaaaggaatagtaaatatttaaagacagaaaattta
caagaagagaaaacaactgcagaaaatttgagtagtgtttgtgagaagtttgagacctgt
gaatctgcttgtgttagtcctgtgtcgtgctttgtcagcagtgctgcatgtgtgcacact
gtggagaatcaagatgtgtcaaaggttgcaaatcatgggaatctgacaacactattaaga
atatgtgctgctaggaatgaagatggaaacagaccacaaaagggagagcagggtagcgaa
aagacattgtctactggtataggggtagaaagcaaactgagactgagtccagtcagaagc
aacagaagtcaaagtgatcagagtaatacagaagagcatgctttccaaagaacaggtctg
aacgcagtcagtgaaacatacttcagttcagaaagcaatcaagtggaaaaggctgaagtt
gttgatgacaaaggactaatgcaacattttcaacctagtccaatgctttgtcctacagct
tgtcaacaaaatccagctgaattcaactgtgaactcactgaaaaaaaaattatcacaaga
gagagaagcctggtaaagggcaatgaagagcgagtaatccagactgtcagcacagggttg
tcagagttttcagttagagaggcactagaagaatctcttaaaggccacagtgattttaca
gatctgtctgaaacccctgatggcttactgtgctctgacaatgatactgaagaaagtgcc
agcttttatgtaactaataggaaagacacatctgctgtgtttgtaaaaagaagtggtgct
gcctgggtgaaagaagtaaatgattcagttgttagctgtaagccaagatctgaaggtatt
caaaggtttcggagaagagcccagaaactgcaatcttcagatgaagaatctagtgatgat
gaagatttaccaagttttcaggaattaatgtttggcaaatcagtaagcacccctttgcag
atccaaaaacaggtgacatctgtggtacagtcttcagcaaatcccagcacattgccttgc
agtgaatgtcttaatgaaaataatgagcagaaaacacttgaagctgccctaagtaatgag
tgtgcttcaccaagccaggagtcagaatgctctgtgaacttattttcttcccagtccaac
atgtctgaagaatcagttgatggagcacaggagctgaagaaaactttaacacaagtgagc
aacgtaaagaagagtaaagaagctcctcagagttgcagtggagggctgaagagactcaaa
aataacttgaatgatgagtaccaagaagatccaaacatgggggcaaacctaggtgaagca
tctggatatgacagcgaaacaagtcgtgtagaggattcacatgaaccattttctcagggt
gaaattctttctacgcagcagaagaatgctatgcagaacaacctaaaaaagctacaacaa
gaaatggctgtacttgaagcagtgctaaagcagcatggaagtcaggacgctgaggtactg
cccttatgtagggaactgccatattgcagtattggaggaacacttggactggagcggatg
agacaagaaacagaaaatgtgtctgagcatgactctgaaaccaagctaactaaggcatcc
gttttaccagttctctgtggaaatgtgaccaagaatccgaatagctcttccttctctgta
aagcatccttgccctcaaactgcagaagcaacagatagttctgctgtagctcagggtgat
aacaaaagcaatgttcaagtatgtaaatcaaagagaagtgtatgttttcctacatctgta
ctgcacaacgtagctgggaaagaaaatgctgcaagttcaggtacaacttgtaggacggaa
atgtcaattgtggcatccggtctgaaccaaagtgaacatttgatggtccagaagtttgcc
agaaaaactcagagcactttctctaatcacattactgatggaacaacccatgtcataatg
aaaacagatgaggagctggtatgtgaacggacattgaagtactttctgggtatcgcagga
agaaaatgggtagttagttaccagtggataattcaatcttttaaagaaggcaggatactg
gatgaggagcactttgaagttaaaggagatgtaatcaatggcagaaatcaccagggtcct
aagagggctaggcaatctccagctgaaaagatctttaaagactttgagatctgctgctgt
ggacctttcactgatatgactacaggacatttagagtggatagtggagctttgtggtgcc
tctgtagtgaaacaacttcatctgttcacccataaagtaaattccactgctgttgttgtt
gtgcagccagatgcttggatggaaggcacaagttatgaagcaatccagcggaagaacaat
gttgctgtggtgactcgagagtgggtgttagatagcgttgcttgctttgagtgccaggag
ttggatgcttaccttgtgtcccaagactga
DBGET
integrated database retrieval system
