Gallus gallus (chicken): 423644
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Entry
423644 CDS
T01006
Symbol
PCDH15, protocadherin-15
Name
(RefSeq) protocadherin-15 isoform 2 precursor
KO
K16500
protocadherin-15
Organism
gga
Gallus gallus (chicken)
Pathway
gga04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
423644 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gga03037
]
423644 (PCDH15)
04515 Cell adhesion molecules [BR:
gga04515
]
423644 (PCDH15)
Cilium and associated proteins [BR:
gga03037
]
Primary cilia and associated proteins
USH complex and associated proteins
423644 (PCDH15)
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Protocadherins
423644 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_Cad99C_N
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
CDH23_a-b
Fibulin_C
RET_CLD1
Rv2386A
Motif
Other DBs
NCBI-GeneID:
423644
NCBI-ProteinID:
NP_001038119
CGNC:
52015
Ensembl:
ENSGALG00000002744
UniProt:
Q0ZM14
A0A8V0Y542
LinkDB
All DBs
Position
6:6303212..7294179
Genome browser
AA seq
2192 aa
AA seq
DB search
MLQQFCLWKWLAVGIAVATILASSLAQNDEDCKLARTGPPATIVPIDEESRNGTILVDNM
LIKGTAAGPDPTIELSLKDNVDYWVILDPISQRLYLNSTGRVLDRDPPMSIQSIVVQVQC
VNKKVGTIINHEVRIVVRDRNDNSPQFQQQRYYVAVNELTPVGTTIFTGFSGNNGATDID
DGPNGQIEYVIQYNPNDKTSNRTFDIPLTLSGAVVLRERLNYEEKTRYFVIVQANDRAQN
LHERRTSTTTLTVDVLDGDDLGPMFLPCVLVNNTRDCRPLTYQASLPELTDPVHVNPISV
TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPQYFHMNLTTAELTLLKPINRDLHQK
FDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTKSTYEGFILESSPVGTTISDSRNL
TSPLQITVLDNDVEETKDPQLHLFLNDYNTFFTVTQSGITRYLTLLQPVDREAQQLYTFS
MIASDGVQESTPVTVNIVVIDANDNSPTFSNISYNVKIYTDMGPGEGVIKLTAVDADEGP
NGQIVYEILAGDQGDFIINDRTGLIAIAPGVVLSVGRSYALTVKASDSAPPAQRRSSITT
VYIEVLPPNNQSPPRFPQLMYSLEVSEAMRTGAILLNLQAFDREGDPIRYLIENGDPQQV
FNLSQSSGLLALGKPLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVFDMF
LPKNLSVQEEEANAFVGQVRATDPDAGVNGQVHYSLANFKNLFRITSNGSIYTAVKLNRE
VRDYYELIVEATDGAVDPRRSTLTLAIKVLDIDDNSPVFTNASYSVLVPENLPPGTVFLQ
IEAKDVDLGSNVTYRIRTQEALEYFALNKYTGELSLLKSLDYESFSDTDATFTFLVEAFD
SKGTMPPGLATVTVRVKDMNDYSPVFSKTLYRGMVAPDAVKGTVITTVSAEDQDPPGTPA
SRVRYKVDVVQFPYSASIFDVEETSGRVVTRVNLNEEPSTVFKLVVIAYDDGDPVKFNTT
TVEIAVLQPSVIPRFTQDEYRPPPVSESAPKGTVVTVVMAAALNQTIVYSIVSGNEEDVF
AINNRTGVISVKKPLDYERVTSYELRVQADSLQVVRSNLRVPSKSNTAKVFIEVKDENDH
APVFTKKMYIGGVSEDAKMFSSVLKVKADDKDTGNYSAMQYRLIIPPIKDGKEGFVIEAY
TGLIKTAMLFKNMRRSYFKFQVIATDDYGKGLSSKADVLVSVVNQLDMQVIVSNVPPTLV
EQNKDQLIGILERYVQDQIPGATVVVESIGARRFGDGYSEEDYTKSDLMVYAIDPQTNRA
IMRNELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDVVANVKKQAQAVGYTEGALLAL
AVIIILCCMPAILIVMVSYRQRQAECAKTARIQMALPAGKPASTAANNLYEELGDSTMRG
YAQQEQQQLLRPSLLRPEELSMESGIDPGQEYYGQDYYSYEHGYELPQYGSRRRLLSPSG
MYDEYGEVMVENDGGYYYSPHGSTAEEGMSQSRGPSSRGISQRAGAQIEGRPLDGGMDLR
HGSGRAYRTSQGRRKLKAVMHLSRVAVSAHKPVGRSESAHSPWKKAKIFPMILQKVKGSR
KDSSYAKLMSARQADGEKSMIIRGSYFQKSTDDRPSMRKLNHVLKRISVSRKFQEPTSKD
AVHVGGKEEEERDEAKSGVSISITAESEHEESDYEKKKKRRRKYSSDESSAKSSSSGSES
EDKDYLTVTLDQDEATESTVDSDEESGHDIGDSDDGSGSSSSSESEEDSSEEDSDEEESD
SDEDDSLSQSSSTQSSFSKSGTSESSSRSSTGRSSTKSRGSSSRGRARRSSQKSVSSNTS
GASYRKTSGSSYKSKTSSASLEIEDTIEEVSEEDEQADAEQVGASPDETIDNTKNKTVSK
TSANAKSAKNAATEEDKRRKSGVNSGDNGDESAEEVDTDGSDKEETVSKNGSEISVNSRG
TGGIKSTASATSGRTATSPDTETQSSDINWARKKRIKLIVDPEYETSSTGEDSAPDSSQR
SRLNNPNIQNNVNGNIYIAQNGSVVRTRRVCLANNLKVTSPVRLGKQFKKLDKLAVTHEE
NVPLNTLSKGSSSSDKVNTRPCSVSFASSIGAENIVTKPGGSKMKSTEEQESVVDNEDTK
EPLESHSEHTQSDEEELWMGPWNNLHIPMTKL
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgctacagcagttctgtctctggaagtggttagctgtagggattgccgtggctactatt
ttagcaagttccttggcccaaaatgatgaagattgcaagttggccagaacaggtcctcca
gccacaatagttcccattgatgaagagagtcggaacggcactatcctggttgacaatatg
ctgatcaaaggaacagcagcggggccggaccccaccattgagctctccttaaaggacaat
gttgattactgggtgatccttgatcccatcagccagaggttgtacttaaacagcactggc
cgagttctggacagagatcctccaatgtccatccagtccattgtggtacaagtccagtgc
gttaacaaaaaggttggcaccattatcaaccatgaggtacggattgtggtgagagacagg
aatgataactcacctcagttccagcagcagcgatactacgtggcagtaaacgagttgact
ccagttggaacgaccatctttacaggattttctggaaacaatggtgctaccgacatcgat
gatggtccgaatggccagatagagtatgtcatccagtacaatcctaatgacaaaacttcc
aacaggacctttgatatccctctcactttgtccggagcagtagttctacgggagagacta
aattatgaggaaaagactcgttactttgtgattgttcaagccaatgaccgagctcagaat
cttcatgagcgaaggacaagtacaaccaccctcacagtggatgtgctggacggggatgac
ctgggaccaatgtttcttccttgtgtcttggtgaataatactcgtgactgtagacctctc
acctaccaagcaagcttgccagaactgactgatcctgtgcatgtgaaccctatcagtgtc
actccacccatacaagccatagatcaagaccgaaacatccagcctccttctgatcgaccg
ggcatcctctattccatcctcgttggtactcccgaggattatccacagtatttccatatg
aacctcacaacagctgaactcacgctcttgaagccaataaacagggatttgcaccagaag
tttgacttggttattaaggctgaacaagacaatggccatcctcttcctgcctttgccaat
ttacatattgaagtccttgatgagaacaatcagaagccttacttcacaaaatctacatac
gagggctttatccttgaatcctccccagtgggaacaaccatctcagatagccggaatctg
acctctccattacaaatcacggtgttggacaacgatgttgaggagaccaaggacccccag
ctccatctcttcctgaatgactacaatacgtttttcactgtgacccagagtggcatcacc
cgctacctcaccctgctgcagccggttgacagagaagcccagcagctctacaccttctcg
atgatagcttctgatggcgtacaggagagtaccccagtgacggtcaatattgtggtgatt
gatgcaaatgataattccccaaccttctccaatatatcttacaatgtcaagatttacaca
gatatggggcctggggaaggcgttataaagctcactgctgtagatgcggacgagggaccc
aatggacagatagtgtatgaaattttggctggggatcagggagacttcatcatcaatgac
cgaacaggccttatcgccattgctccaggagttgtattgtcagtggggcgatcctatgct
ctcactgtcaaagcatctgatagcgctcctcctgcacagagaaggagctctattactaca
gtttatatcgaggtccttccacccaacaaccagagccctccccgcttcccgcagctgatg
tacagcctggaagtcagtgaggccatgaggactggagcgattttgttaaacctgcaggct
tttgatagagagggtgaccctataagatacctcattgagaatggagatccgcaacaagtt
tttaatctctctcaaagttctggactgctagccttaggaaagcccttggacagagaaagc
actgatcgttatattctgatcgttacagcctcggatggcagaccagatgggacttcaact
gctacagttaatattgtggtgacggatgtaaatgacaatgggccagtttttgatatgttt
ctacctaaaaacctgtctgtacaggaagaggaagccaatgctttcgttggtcaagtaagg
gctacagacccggatgctggtgttaatggtcaagttcattacagtctggcaaacttcaag
aatctttttcgaatcacttcaaatggcagcatatacacagcagttaagctgaacagagaa
gtacgagactattacgaacttattgttgaagcaacagatggagctgtggaccctcgccgt
tcaacactaactttagcaatcaaggtgctggatattgatgacaacagccctgtttttaca
aatgcttcctactctgtcttggtgcctgaaaatctaccacccggcactgtcttccttcag
atagaggcgaaagatgttgatcttggttctaatgttacctatcgaatccggacgcaggaa
gcactggagtattttgcactgaacaagtatacgggcgagttatcacttctgaagtccttg
gattatgagtcattctctgacacagatgcaactttcaccttccttgtggaagccttcgac
agcaagggcactatgcctccaggtcttgctaccgtcacagtgagggtaaaggatatgaat
gattactcgccggtatttagcaagacgctctacagaggaatggttgctcctgatgctgtc
aagggcactgttatcactaccgtttcagctgaggatcaagatcctccgggcacaccagca
agccgagtccggtacaaagttgacgttgtccagtttccttacagtgccagcatttttgat
gtggaggaaacctcaggacgtgtagtaacacgggtaaacctaaatgaagagccaagtaca
gtgttcaagctagtggtcattgcatatgatgatggagatcctgtgaagttcaataccact
actgtagaaattgctgtacttcaaccttcggtaatcccacggttcacgcaggacgaatac
agaccccccccagtaagtgaaagtgcaccaaaaggaactgtggtcactgtggtgatggca
gctgccttgaaccaaactatcgtatattcaatagtgtcaggaaatgaagaggatgtgttt
gctattaataacagaacaggcgtgatctccgttaaaaagcctctggattatgaaagagtg
acaagttatgaacttcgagttcaggcagactcgttacaagtggtacgatccaacctgcgt
gtcccatccaaaagtaatacagccaaagtgttcattgaagtgaaggatgaaaacgatcat
gcgcctgtctttaccaaaaaaatgtacattggaggagtgtctgaagatgctaaaatgttt
tcttctgtgcttaaagttaaggctgacgataaagacactgggaattacagtgccatgcag
tacaggctcatcattcctccaatcaaggatggtaaagaaggttttgtgattgaagcttac
acagggctaataaaaactgctatgctgttcaaaaatatgagaagatcctatttcaagttt
caggtcattgcgactgatgattacggaaaaggactgagcagcaaagcagacgtactcgtc
tctgtggtcaatcagttggatatgcaagtcatcgtctctaatgttcctcccacccttgtg
gaacaaaacaaagatcaactcatagggattctggaacgctacgtccaagatcagattcct
ggtgcaaccgtcgtggtggaatccattggcgcacggaggtttggggatggatactccgaa
gaggattataccaagtctgacctcatggtctacgccattgacccacaaacaaatagagcc
ataatgaggaatgaactttttaagttcctcgatggcaaactgctggatatcaataaagag
tttcagccgtacctgggacaggggggacgcatcctggagatccgcaccccggacgtggta
gcaaatgtcaagaagcaggcgcaagctgtgggctacacagaaggtgcattactggccctg
gccgtcattatcatcctgtgctgtatgccagctattttaatagtcatggtcagctacaga
cagcgacaggctgagtgtgctaagactgcaagaatccagatggccctaccggcaggcaaa
ccagcaagcactgctgccaataacctctacgaagagcttggtgacagcaccatgcgagga
tatgcacagcaagagcaacagcagttgctgagaccttcccttctcagaccagaggagtta
agtatggagtctggaattgatccagggcaggaatactacgggcaagattactacagttat
gagcatgggtatgaactgcctcagtatgggagccgccgccgcttgctgtctccttcaggg
atgtatgatgagtatggggaagtcatggtggagaatgatggcggctactactatagtcca
catggatcaacagcggaagagggaatgagtcaaagcagaggtccttcgagcagaggtata
agccagagagcaggggctcaaatagaaggtagacctttagatggtgggatggatctaagg
catggctctggaagagcatatagaaccagccagggaaggagaaaactaaaagcagtgatg
catttaagtcgtgtagcagtcagtgctcacaaaccagtaggaagaagtgagtctgctcat
tctccatggaagaaagcaaagatattcccaatgattctgcagaaagtgaaaggcagtagg
aaggattccagttacgccaagttgatgtcagctcgccaggcggatggtgagaaaagcatg
attatcaggggaagctacttccagaaatcaacagatgacagaccttcaatgagaaagcta
aatcatgtgttaaaacgcatcagtgtctccagaaaatttcaagagcctactagcaaagat
gcagtgcatgtgggaggaaaagaagaggaagaaagagatgaagcaaagtcaggagtttca
ataagtatcacagcagagagcgaacatgaggaaagtgattatgagaagaagaagaagagg
agaagaaaatacagctcggatgagtcctccgcgaagagtagtagctctgggtcggagtca
gaagataaagactatttgacagtaactctggaccaagatgaagccactgaaagtaccgtg
gactccgatgaggaatctggacacgatatcggtgattccgatgatggctctggatccagc
tctagcagtgaatcagaggaggactcttctgaagaggacagcgatgaggaagagtctgac
agcgatgaagacgatagcctgtcacaaagctcatctacacaaagttcattcagcaaatcg
ggaactagtgagtccagcagtagaagtagtactggaaggtcaagtacaaaaagtagggga
agtagctctcgtggcagagcaaggcgatccagccagaaatcagtcagctcgaacacatca
ggtgcaagctacaggaaaacatcgggatccagctacaagagcaaaacctcctctgccagc
cttgaaatagaagacacgatagaagaggtttcagaagaagatgagcaagcagacgcggag
caagtcggtgcaagccctgatgagacaatagataacacaaagaataagacagtttctaaa
acatctgcaaatgcaaaaagtgctaaaaatgctgctacggaagaagacaagagaagaaag
tcgggtgttaacagtggggataatggggatgaaagcgcagaagaggttgatacagatggt
agtgacaaggaggaaactgtcagtaagaacggaagtgaaatcagtgttaattccagaggt
actggagggataaaaagcacagctagtgccacttctggcagaactgctacttcccctgat
actgagactcagagttctgacatcaactgggccagaaagaaaaggatcaagttgattgtt
gacccggagtatgagaccagctctactggagaagacagcgctcctgattccagccagagg
agtcgtcttaataaccccaatattcaaaacaacgtcaatggtaacatctacattgcacag
aatggctctgttgtcagaacccgtcgtgtttgccttgctaataatttaaaagtgacatct
ccagtgaggctgggtaaacagttcaagaaactggacaagcttgcagtgacacacgaggag
aatgtcccactgaacacattgtcaaagggatcatcttctagtgataaagtgaacacaaga
ccttgtagtgtctcatttgcttcctctataggggccgaaaacatagtaacgaagccaggt
ggctccaaaatgaaaagcacagaagagcaagaatctgttgttgataacgaggacacaaaa
gagcccttggagtctcacagtgaacacacacagtcagatgaagaggaactctggatgggc
ccttggaataaccttcacataccaatgacaaaactgtga
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integrated database retrieval system
