Gallus gallus (chicken): 428281
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Entry
428281 CDS
T01006
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gga
Gallus gallus (chicken)
Pathway
gga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
428281 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gga03041
]
428281 (EFTUD2)
Spliceosome [BR:
gga03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
428281 (EFTUD2)
Complex C
U5 SnRNP specific factors
428281 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
428281
NCBI-ProteinID:
NP_001026672
CGNC:
656
Ensembl:
ENSGALG00000000988
UniProt:
Q5F3X4
LinkDB
All DBs
Position
27:complement(3674632..3690286)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEDDELGRESKELDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacactgacctgtacgatgagtttgggaactacattgggccggagctggactctgac
gacgaggacgatgagctgggccgggagtccaaggagctggatgagctcgaggatgatgat
gatgacgatgatatgggggaccacgatgaggaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccaccgccgaggaggtctacgggcccgaagtggagaccata
gtgcaggaggaggacacgcagcctctcactgagcctattattaaacccgtgaaaaccaaa
aagttttctttgatggaacagacgttaccggtcaccgtctatgagatggatttcctggca
gatctgatggacaactctgagctgattcggaatgtgactctgtgtgggcaccttcaccac
ggcaagacttgttttgttgactgcctgatagagcagacgcacccagaaatcaggaagcgc
tacgaccaggatctttgctacactgatatattgttcacagagcaggagaggggagtgggg
atcaagagcacaccagtgaccattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcattgacaccccaggtcatgtcaatttttctgacgaggtgacagctggccttcgt
atttcggatggcgttgtgcttttcattgatgcagccgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaacggctggcagtgactgtgtgcatcaacaaaata
gaccgcctgatcctggagctgaagctgccccctacagatgcttactacaaactccgacat
attgtggatgaagttaatggtctgatcagcatgtattccactgatgagaacctcgtcctg
tctccccttctggggaacgtgtgtttctccagctcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagatatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccaaaaacgcggaagttcacaaagaaagcc
ccaaccagcagctcccagcgcagctttgtggagttcattcttgagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacaaccctgcctcggactctggatgaacttggc
atccacctgaccaaagaggaattgaaattgaacattcgaccgctcctacggcttgtctgc
aagaaattcttcggggagttcacaggctttgtggacatgtgtgtgcagcatattccctcc
ccaaaggtgggagccaagacgaaaatcgagcacacctacactggtggcgttgactccgat
cttggggaggccatgagtgaatgtgaccctgacggtccgctgatgtgtcacacaacaaaa
atgtacagcacagatgacggtgttcagttccacgcctttggcagagtgctcagcggtacc
atccatgctgggcagcctgtgaaggtcctgggagagaactacaccttggaggatgaggag
gattcccagatctgcactgttggacgcctctggatctcagttgcgaggtatcacattgag
gttaaccgtgttcctgctggcaattgggtgctgatagaaggagtggaccagcccattgtg
aagactgcaactgtcacagagccacgtggcaatgaggaggctcagatcttccgccctttg
aagttcaacacaacgtctgtcatcaaaatagcagtagagccagtcaacccctctgagctc
cccaaaatgttggatggtcttcgcaaagtcaacaagagctacccgtcacttaccacaaag
gtggaagagtctggagaacacgtgatcctggggacaggggagctctatctggattgtgtg
atgcatgatctgcggaagatgtattctgagattgatatcaaggttgctgatccggttgtg
acgttctgcgagacagtggtggaaacgtcctccctgaagtgctttgctgagactcccaat
aagaagaacaagatcacgatgattgccgagcctctggagaagggacttgcggaggacatt
gaaaatgaagtggtccaaataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccggatgccact
ggcccaaacatcctggtagatgatactctgccctcagaggtggacaaggcgctgctgggc
tccgtgaaggacagcattgtgcagggatttcagtgggggaccagggaagggcctctctgt
gatgagttgatccgcaatgtgaagtttaagatcctggacgcagtgattgctcaggagccc
ttgcaccgaggtggaggacagatcatcccgacggcacggagggtggtgtactcagctttc
ctgatggccacccctcgtctgatggagccctactacttcgtggaggtgcaggccccagct
gactgcgtgtctgctgtgtacaccgtgctggcgcggcgaagaggccacgtgacacaggac
gctccgatcccgggctcccctctgtacaccatcaaagccttcatccccgccatcgattcc
ttcggcttcgagacagacctgaggacccacacacagggacaggcgttctcactgtctgtc
ttccaccactggcagattgtgcccggtgaccctttggacaaaagcatcgtcatccgcccc
ctggagcctcagccggccccacatttggccagggagttcatgatcaagacccggcgcagg
aagggcttgagcgaggatgtgagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaactaccccatgtga
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