KEGG   Gallus gallus (chicken): 770805
Entry
770805            CDS       T01006                                 
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X1
  KO
K14381  sequestosome 1
Organism
gga  Gallus gallus (chicken)
Pathway
gga04137  Mitophagy - animal
gga04140  Autophagy - animal
gga04217  Necroptosis
gga04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:gga00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    770805 (SQSTM1)
   04137 Mitophagy - animal
    770805 (SQSTM1)
  09143 Cell growth and death
   04217 Necroptosis
    770805 (SQSTM1)
   04218 Cellular senescence
    770805 (SQSTM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gga04131]
    770805 (SQSTM1)
   03029 Mitochondrial biogenesis [BR:gga03029]
    770805 (SQSTM1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gga04147]
    770805 (SQSTM1)
Membrane trafficking [BR:gga04131]
 Autophagy
  Mitophagy
   Cargo receptors
    770805 (SQSTM1)
  Pexophagy
    770805 (SQSTM1)
  Aggrephagy
    770805 (SQSTM1)
  Xenophagy
    770805 (SQSTM1)
  ER-phagy
   ER-phagy recepters
    770805 (SQSTM1)
  Other autophagy associated proteins
   Midbophagy
    770805 (SQSTM1)
Mitochondrial biogenesis [BR:gga03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    770805 (SQSTM1)
Exosome [BR:gga04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   770805 (SQSTM1)
SSDB
Motif
Pfam: UBA_5 ZZ PB1
Other DBs
NCBI-GeneID: 770805
NCBI-ProteinID: XP_001233249
CGNC: 4412
Ensembl: ENSGALG00000035804
UniProt: A0A1D5PLN4
LinkDB
Position
13:complement(14167411..14171820)
AA seq 453 aa
MAALTVKAYLLGKEDATREIRRFSLMPPVRYQAVHDRVAELFQGLLRAGPPPAFRMHYKD
EDGDLIAFSSDEELDLAMPYVQDGVFRVYIKEKKECRREHRSQCSQEPPRDMVHPNVICD
GCQGPVVGARFKCTVCPDYDLCSTCEGKGIHKEHNMVMFQSPLLNPFEWYPRGRWLRKMR
HGVPPFPWMHCWGYPGPAAPCQNSEQAQADAAASSPPAAGEASTNSQPQDPNVTFLKNVG
ESVAAFLSPLGIEVDIDVEHGGQRSKVTPASPNQENNNAESSSSTLNQNSQTKPYWSNTE
SATVVNTVAEQIQDMVIDPVPTQMEDGSLQSQEHSESSSSSGGDEDWTHLSSKEVDPSTG
ELQSLQMPETDDPSSLDVAQEAPQAGPTGLREAALYPHLPPEADPRLIESLSQMLSMGFS
DEGGWLTRLLQTKNCDIGAALDAIQYSKQPPSL
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggcggcgctgacggtgaaagcctacctgctgggcaaggaggatgcgacccgcgagatc
cgccgcttctccctgatgcctcccgtccgctaccaggccgtccacgaccgcgtcgccgag
cttttccaggggctgctgcgggccgggccgccgcccgcgttccgcatgcactataaggat
gaagacggggacctgatcgcgttctccagcgacgaggagctggatctggccatgccttac
gtgcaggacggagttttccgcgtgtacatcaaagagaaaaaggagtgcaggcgtgaacat
cgctcccagtgcagccaggagcctccccgtgacatggtgcaccccaacgtcatctgcgac
ggctgccaggggccggtggtgggcgctcgcttcaagtgcaccgtctgcccagactacgac
ctgtgcagcacctgcgagggtaaaggcatccacaaggagcacaacatggtgatgtttcag
agcccgctgctgaatccgtttgagtggtatcccagagggcgctggctccggaagatgcgg
cacggtgttccacccttcccctggatgcactgctgggggtatcccggacctgcagctcca
tgccagaactcggaacaggcccaagccgatgctgctgcctccagtccacccgctgctgga
gaagcttctactaacagccagccccaggaccccaatgtcaccttcttaaagaatgttggg
gagagtgtggcagcttttctgagccccctgggtattgaagttgatattgatgtggaacac
ggaggacagagaagcaaagtgactcctgcttctcctaatcaagagaataacaatgctgag
tcaagcagcagtacgcttaaccagaacagtcagaccaaaccatactggagtaacacagag
tctgctacggtcgtaaacactgttgcagagcagatacaagacatggtgatagatcctgtg
cccacacaaatggaagatggcagcctccagtcccaggaacacagcgagtcaagcagttcg
tcagggggtgatgaggactggacccacttatcttccaaagaagtggatccttccacaggt
gaactgcagtctctacaaatgccagagacagatgatcccagctccctagatgtagctcag
gaagccccccaggcaggacctacagggctgagagaggctgcactctatccacatctccca
ccagaagcagaccctcgcttgattgaatccctgtcccagatgctctctatgggcttctct
gatgagggtggatggctcactcgactcctgcagacaaagaactgtgacatcggggcagca
ctagatgccatccagtattccaagcagcctcctagcttgtag

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