Geobacillus sp. GHH01: GHH_c15980
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Entry
GHH_c15980 CDS
T02455
Symbol
yodJ
Name
(GenBank) putative carboxypeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh00550
Peptidoglycan biosynthesis
ggh01100
Metabolic pathways
ggh01502
Vancomycin resistance
ggh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GHH_c15980 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GHH_c15980 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GHH_c15980 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggh01002
]
GHH_c15980 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ggh01011
]
GHH_c15980 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ggh01504
]
GHH_c15980 (yodJ)
Enzymes [BR:
ggh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
GHH_c15980 (yodJ)
Peptidases and inhibitors [BR:
ggh01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
GHH_c15980 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
ggh01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
GHH_c15980 (yodJ)
Antimicrobial resistance genes [BR:
ggh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
GHH_c15980 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF1244
Pilus_CpaD
Peptidase_M15_4
DCD_C
Prok-TraM
Motif
Other DBs
NCBI-ProteinID:
AGE22129
UniProt:
L7ZY85
LinkDB
All DBs
Position
1600584..1601405
Genome browser
AA seq
273 aa
AA seq
DB search
MNQRWQAAMLVCLLLAGCQTGESGSNGAAGPSGQPPESAVHPSDHQQQGKTSESPVDPDL
QLEAKYWNIVKVQNGQKVIQNPDNILVLVNKEQSLPPGYKPADLVVPRVPFLCADPNAEK
RHMRAEAAAALEEMFAAARRDGIELVAVSAYRSYERQQVIFAEEVRQKGREKAVQAVAHP
GQSEHQTGLAVDISSRSAGCQLTESFGATKEGQWVAAHAHEYGFIIRYPKGKEAVTGYKY
EPWHLRYVGRKAAAVIKKRGLTLEEYFKVVKKV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcgatggcaagcggcgatgttggtgtgcctgctgctcgccggctgccaaaca
ggggagagcggcagcaacggtgcggccggcccgtccggccagccgccggaaagcgcggtg
cacccaagcgatcatcaacaacaggggaaaacgagcgagagccccgtcgatcccgatttg
cagcttgaggcgaaatattggaacatcgtcaaggtgcaaaacggacaaaaagtgattcaa
aaccctgacaacattttggtgctcgtcaataaagaacagtcgctcccgcctggctataag
ccggcggacttggtcgtgccgcgcgtgccgtttttgtgtgctgacccgaacgcggaaaag
cggcatatgcgggccgaagcggccgcggcgcttgaggagatgtttgccgccgcacgccgc
gatggcattgagctggtggccgtgtccgcttatcgttcatacgagcggcagcaggtgatt
tttgctgaagaagtgcggcaaaaggggagggaaaaagcggttcaagcggtcgctcatcca
ggtcagagcgagcatcagacagggctggcggtcgatatcagcagccgctcggccggctgt
cagctgaccgaatcgttcggggcgacaaaagaagggcaatgggtagccgcccatgcgcac
gagtacggattcatcatccgctacccgaaaggaaaggaagcggtgaccggctacaagtat
gagccgtggcatctccgctatgtcgggcggaaggcggccgcggtgatcaaaaagcgcggc
ttgacgcttgaagaatatttcaaagtagtgaaaaaagtgtga
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