Gavialis gangeticus (Gharial): 109286754
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Entry
109286754 CDS
T07453
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04514
Cell adhesion molecules
ggn04520
Adherens junction
ggn04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109286754 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109286754 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
109286754 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109286754 (PTPRF)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
109286754 (PTPRF)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
109286754 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_5
Y_Y_Y
Fn3_PTPRU
Insulin_TMD
DUF7359
DUF3377
TMEM154
Motif
Other DBs
NCBI-GeneID:
109286754
NCBI-ProteinID:
XP_019356998
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MVPNFCVPVFVVPAVVLCCLMPSAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLT
VLEEDHIPAGFPIIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTAVSNGR
IKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPTDHEV
MPGGSVNLTCVAVGAPMPYVKWMAGLEELTKEDEMPVGRNVLELNNIMHSANYTCVAISS
LGMIEATAQIAVKALPKPPSDLLVTETTATSVTLTWDSGNSEPILFYVIQYKPQSWEGPF
QEVDGVATTRYSIGGLSPFSEYEFRVLAVNNIGRGPPSELVEARTGEQAPSSPPLKVQAR
MLSASTMLVQWEPPEEPNGLIRGYRVYYTTDPHLSLSMWQKHNTDDSHLTTVGSLITGTT
YSIRVLAFTSVGDGPPSDSIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERIVKY
ELLYREGEDGVQRKVEFNPSSSYAVEGLKPDTLYHFRLGARSELGLGVYTPTIEARTAQS
TPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGEDGAKHVVEGIGR
ERSSWEITDLEKWTEYKVWVRAHTDVGPGPESLPVHVRTDEDVPSAPPRKVEVESVNSTA
IRVSWKLPLSNKQHGQIRGYQVTYVKLESNEPRGQPIIKDVMLSEAQWRAEDSVDHETII
SGLLPETTYSITVAAYTTKGDGARSKPKVITTTGAVPGKPSMMISTTAMNTALMQWHPPK
EMVGELLGYRLQYKRVDEEKMNTIDFGRNDHHYTVTNLHKGATYIFKLSAKNRAGLGEEF
EKEITTTEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGRIVSYTVVYRDINSQQDL
TNVTRNTNITLTNLKPDTTYDIKVRARTSKGPGPLSPSIQSRTMPVDQVFAKNFRVNAAM
KTSVLLSWEVPDSYKSSVPFKILYNSQSVEVDGHSMKKLISDLQPDTEYSFVLMNRGSSA
GGLQHLVSIRTAPDVLQSKPVATNKYIQDGKFTLTLPKVQTSEPVRWYYIVVVPTDQATS
SLTTRWRSPDEMELDQLLEAINQGSQGRRQRRQAERLKPYIAAQMDLLPETFTLGDEKNY
KGFYNKPLSEDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVSSAKHQDEPEMLWVMGP
VLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQT
PGMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYAN
VIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRT
ATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYMVRTFALYKNGSSEK
RELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDA
MLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAH
IQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCL
QPIRGVEGSDYVNASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLRE
MGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDW
PEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEG
VVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcgtcccagtattcgtcgtgccagcagtagttctgtgctgcttg
atgccttcggctggggcagacagcaagccaacctttatgaaagctcccgaagatcagatt
gggatttctggaggcgtagcctcgtttgtgtgccaggcaactggagagcccaaacctcgc
atcacatggatgaagaaagggaagaaggtcagctcccagcgctttgaggttattgaattt
gatgatggatcgggatcggttctccggattcagccgctacgtgttcaccgagatgaagcc
atctacgagtgcacggcgaccaacagtgttggggagataaacacaagtgccaaattaaca
gtgttagaagaggatcacatccccgctggcttccccatcatcgacatgggcccacagctg
aaggtggtggagaaggcccgcacggccacgatgctctgcgccgccagcggcaacccagac
cctgagatttcctggttcaaggatttcctcccggtggataccgccgtgagcaatgggcgc
atcaaacagctccgctcaggggctctgcagatagagaacagcgaggagtcggaccaaggc
aaatacgagtgtgtcgcaaccaacagcgcaggaacccgttactctgccccggctaacctt
tacgtccgagtgcggcgtgtggcccctcgcttctccatccctccaaccgaccacgaggtg
atgcctggggggagcgtgaacctcacatgcgtggcggtgggagccccgatgccctacgtg
aagtggatggccggcctggaggagctgaccaaggaagacgagatgcccgtcggccgcaac
gtcctggagctgaacaacatcatgcactccgccaactacacctgcgtggccatctcctct
ctgggcatgatcgaagccacggcccagatcgccgtcaaagcgctgcccaagccgccttcg
gacctgctcgtcacagagacgacggccaccagcgtgaccctcacctgggactcgggcaac
tcggagcccatcttgttctacgtcatccagtacaagccccagtcctgggagggcccgttc
caggaggtggacggcgtggcgaccactcgctacagcatcggcggcctcagccccttctcc
gagtacgagttccgcgtcctggccgtcaacaacattggccggggcccccccagcgagctg
gtggaggcgcggacgggcgagcaggctccctccagcccgcccctgaaggtgcaggcccgg
atgctgagtgccagcaccatgctggtgcagtgggagccgccagaggagcccaacgggctg
atccgcgggtaccgcgtgtactacaccaccgacccccacctgtccctgagcatgtggcag
aagcacaacactgacgacagccacctcaccacggtgggcagcctcatcaccgggaccacc
tacagcatccgcgtcctggccttcacgtccgtgggggatgggcccccctcagacagcatc
caggtcaaaacccagcagggggttccagcgcagccggctgatttccaggcagaggccgag
tcggacacccggatcctgctgacctggctccccgcctcgcaggagcgcatcgtcaagtac
gagctgctgtacagggaaggagaggatggcgtccagcgcaaggtggagttcaaccccagc
tcctcgtacgcggtggaaggcctcaagcccgacacgctgtaccacttccggctgggcgcc
cgctcggagctgggcctgggcgtgtacaccccgaccatcgaggccaggactgcccaatcc
accccctccgccccgccccaagaggtcgagtgtgtaagcaccagctccaccaccatccgg
gtaagttgggtgccgccgccggcccagagccgcaatggggtgatcacgcagtactccatt
gcgtaccaggcggtggaaggagaggacggcgccaagcacgtggtggaaggcattggacgg
gagcgctccagctgggagatcacggacctggagaaatggaccgagtacaaggtgtgggtg
cgggctcacaccgatgtgggccccggcccggagagcctccccgtgcacgtgcgcactgac
gaggacgtgcccagcgccccgccgcggaaggtggaggtggagtccgtgaattcgacggcc
atccgggtcagctggaaactgcccctgtccaacaagcagcacgggcagatccggggctac
caggtgacttacgtgaagctggaaagcaatgagccgcgagggcagccgatcatcaaggac
gtcatgttatcggaggcgcagtggagggctgaggactccgtggaccacgaaaccatcatc
agtggcctgctgcccgagaccacctactccatcacggttgcagcctacaccaccaagggg
gatggcgcacgcagcaagcccaaagtcatcacgaccacgggggcagtccccggcaagccc
tcaatgatgatcagcacgacggccatgaacacggcgctcatgcagtggcacccgcccaag
gagatggtgggggagctgctgggctaccggctgcagtacaagcgggtggacgaggagaag
atgaacacgatcgacttcgggaggaacgaccatcactacaccgtgaccaacctacacaag
ggagccacctacatcttcaagctgtcggccaagaaccgggcaggcctgggggaggagttc
gagaaggagatcacgaccacggaggacgtgcccagcggcttcccacagaacctgcgcgtg
gtggggctcaccacctccaccaccgaggtggcctgggaccccccggtgctggccgagagg
aacgggcgcatcgtcagctacacggtggtgtacagagacatcaacagccagcaggacctg
accaatgtcaccaggaacaccaacatcaccctcaccaacctgaagcccgacaccacctat
gacatcaaagtgagggcccgcaccagcaaggggcctggacccctcagccccagcatccag
tcccggaccatgcccgttgatcaagtgtttgccaagaacttccgcgtcaacgcggcgatg
aaaacctccgtgctgctgagctgggaggtgccggactcctataagtcttcagtgcctttc
aagatcctgtacaacagccagagcgtggaggtggacggccactccatgaagaagctcatc
agcgacctccagccggacacggagtactccttcgtgctgatgaaccgcggcagcagcgcg
ggcgggctccagcacctcgtctccatccgcacagcgcccgacgtcctgcagagcaaaccc
gtcgccaccaacaagtacatacaggatgggaagttcaccctcacccttcccaaagtccag
acctcagagcctgtcaggtggtactacattgtcgtggtgccaacagaccaagccaccagc
agcctcaccacccgctggcggagccccgatgagatggagctggaccagttactcgaggcc
atcaaccaggggagccagggcaggcgccagcgccgccaggccgagcgcttgaagccgtat
atcgctgctcaaatggacctcctgccagagaccttcactttaggggacgagaagaactac
aaaggcttctacaacaagcccctctcggaagacctcagctaccgctgcttcgtgctggcc
tcgctggaggacggggatacgaagaggtacgccgccagcccctactcagacgagatcgtg
atggaagtgtcctcggcaaagcaccaggatgagcctgagatgctgtgggtgatgggaccg
gtcctggccgtcatcctcatcatcatcatcgtcatcgccatcctgctcttcaaaagcaaa
caagaaaggaaaagggctcactccccctcttccaaggatgagcactcgatcggcctcaag
gactccctgctggcccactcctccgacccggtggagatgagacgcctcaattaccagacc
ccaggcatgcgcgaccacccgcccatccccgtgaccgacctggccgacaacatcgaccgg
ctcaaggccaacgatggactgaagttctcgcaggagtacgagtccatcgaccccgggcag
cagttcacctgggagaactccaacctggaagtgaacaagcccaagaaccgctatgccaat
gtgatcgcctacgaccactcgcgcgtcatcctgacctccatcgacggggtgcccggcagc
gactacatcaacgccaactacatcgacgggtaccggaagcagaacgcctacattgccacg
caggggcccctgccggagaccctcagcgacttctggcggatggtgtgggagcagaggacg
gcgaccatagtcatgatgaccaggctggaggagaagtccagggtgaagtgtgaccagtac
tggccaagccgaggcaccgaaacctacgggatgatccaggtgacgctgctggacacggtc
gagctggcgacctacatggtccggacctttgccctgtacaagaacggctccagcgagaag
cgagaattgcggcagttccagttcatggcctggcccgaccacggggtgccggagtacccc
acgcccatcctggccttcctgcggcgggtgaaggcctgcaacccgcctgacgccgggccc
atggtcgtccactgcagtgctggcgtgggcaggacagggtgcttcatcgtcatcgacgcc
atgctggagcggatgaagcacgagaagacagtcgacatctacggccacgtgacgtgcatg
cgctcgcagcggaactacatggtgcagaccgaggaccagtacatcttcatccacgaggcc
ttgctggaggcagccacctgtggcaacaccgaggtgcccgcccgcaacctcttcgctcac
atccagaagctgacccaggtcccgccgggcgagagcgtcaccgcgatggagctggaattc
aagctgctggccaactctaaagcacatacctcacgtttcatcagtgccaaccttccctgc
aacaagttcaagaaccgcctcgtgaacatcatgccgtacgagctgacgagagtctgcctg
cagcccatccggggcgtcgagggctccgactacgtcaacgccagcttcatcgacggctac
aggcagcagaaagcctacatcgccacgcaggggccgctggcggagaccacagaggacttc
tggcggatgctctgggagcacaactccaccatcgtggtgatgctgacgaagctgcgtgag
atgggaagggaaaagtgccatcagtactggccggcagagcgctcagcccggtaccagtac
ttcgtggtggaccccatggcagagtacaacatgccccagtacatcctccgcgagttcaag
gtcaccgatgccagggatggccagtcgcggaccatccgccagttccagttcacggactgg
cctgagcagggagtgccaaagacaggggagggcttcatcgacttcatcggccaagtgcac
aagaccaaggagcagtttggccaggacgggcccatcacggtgcactgcagcgccggggtc
ggccgcaccggggtcttcatcacgctgagcattgtgctggagcggatgcgctacgagggc
gtggtggacatgttccagaccgtgaagaccctgcgaacgcagcggcccgccatggtgcag
acagaggaccagtaccaactgtgctaccgagcggcgctggagtacctgggcagcttcgac
cactatgcaacgtaa
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integrated database retrieval system
