Gavialis gangeticus (Gharial): 109287006
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Entry
109287006 CDS
T07453
Symbol
PBX1
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109287006 (PBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109287006 (PBX1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109287006 (PBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
HTH_3
DUF7260
GAIN
UCH
Motif
Other DBs
NCBI-GeneID:
109287006
NCBI-ProteinID:
XP_019357429
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MDDQPRLMHSHAGVGMAGHPGLSQHMQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDE
AQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGP
EKGGGSAAAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQCFLPSQACNE
FTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDAR
RKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKN
IGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLN
GDSYQGAQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSV
TSPTEGPGSVHSDTSN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagcccaggttgatgcattcccatgctggggtgggaatggctggacacccc
ggcctgtcccaacatatgcaggatggagcaggagggacagagggggaggggggcagaaaa
caagacattggagacattttacagcagatcatgaccatcacagaccagagtttggatgag
gcgcaggccaggaaacatgctttaaactgccacaggatgaagccggccctttttaacgtc
ttgtgtgaaatcaaagaaaaaacagtcctgagtattcggggagcccaggaagaggagccc
acggacccccagctgatgcggttggacaacatgctgttggcggagggggtagcaggacct
gagaaaggagggggctcagcagcagcagccgctgctgcagcagcatccggaggggctggt
tcagacaactccgtggagcattctgactacagagctaagctttcacagatccgacagatc
taccacacggagctggagaaatacgagcagtgtttcttgccctcccaggcctgcaacgaa
ttcaccacccacgtgatgaacctgctgcgtgaacagagtcggacccggcccatctcaccg
aaggagatcgaacggatggtcagtatcatccaccgcaagttcagctccatccagatgcag
cttaagcaaagcacgtgcgaagccgttatgatcctacgctcacgatttctggacgcgcgg
cggaagagaagaaacttcaacaagcaggctacggaaatcctgaatgagtatttctattcc
catctcagcaacccttaccccagtgaggaagccaaagaggagctagccaagaaatgtggc
atcacagtctcacaggtatcaaactggtttggaaataagcgaatccggtacaagaagaac
ataggtaaatttcaagaggaagccaatatttatgctgccaaaacggctgtcactgctaca
aatgtgtcagcccatggaagccaagctaactcaccctcaactcccaattcagctggttct
tccagttcttttaacatgtcaaactctggagatttgttcatgagcgtgcagtcactcaat
ggggattcttaccaaggggcccaggttggagccaacgtgcagtcacaggtggataccctt
cgccatgttatcagccagacaggaggatacagtgacgggctcgcagcaagtcagatgtat
agtccgcagggcatcagtgctaatggaggttggcaagatgctactaccccctcatcagtg
acctcccccacagaaggccctggcagcgttcactctgatacctccaactga
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