KEGG   Gavialis gangeticus (Gharial): 109289366
Entry
109289366         CDS       T07453                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03440  Homologous recombination
ggn03460  Fanconi anemia pathway
ggn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109289366 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    109289366 (BRCA1)
   03460 Fanconi anemia pathway
    109289366 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ggn01009]
    109289366 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ggn04121]
    109289366 (BRCA1)
   03036 Chromosome and associated proteins [BR:ggn03036]
    109289366 (BRCA1)
   03400 DNA repair and recombination proteins [BR:ggn03400]
    109289366 (BRCA1)
Enzymes [BR:ggn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109289366 (BRCA1)
Protein phosphatases and associated proteins [BR:ggn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109289366 (BRCA1)
Ubiquitin system [BR:ggn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109289366 (BRCA1)
  Multi subunit type E3
   BRCC complex
    109289366 (BRCA1)
Chromosome and associated proteins [BR:ggn03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     109289366 (BRCA1)
DNA repair and recombination proteins [BR:ggn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     109289366 (BRCA1)
    BRCA1-A complex
     109289366 (BRCA1)
    BRCA1-B complex
     109289366 (BRCA1)
    BRCA1-C complex
     109289366 (BRCA1)
    BRCA complex
     109289366 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     109289366 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_2 zf-RING_2 BRCT_2 BRCT_3 zf-Nse zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 zf-RING_6 zf-ANAPC11 zf-RING_10 U-box Prok-RING_4 zf-MIZ Zf_2nd_IFT121 zf-rbx1
Other DBs
NCBI-GeneID: 109289366
NCBI-ProteinID: XP_019360910
LinkDB
Position
Unknown
AA seq 1877 aa
MDFSVVALGDVQNVLSAMQKNLECPICLEVMKEPVSTKCDHIFCRFCMFKLLSKKKNSLV
QCPMCKTEVTKRSLQENPRFKQLIEGLLKTIHAFELDAGVKFLNHQDFSKKPIETSSADT
LRKESCVIQSKGYRNRQKKVKENGQANLTLQGTITGVQLSGDMVKWSSPRNKKRKLDSDK
IMYIEFGSDSSEDLFKKAGGSRAQDKEMFQTPPEKLEELKYAENESESPHNVQVTNLGGR
EILLSDFRGECDFSEEGLGSSEDIQNISEDFQAAQVNLSEERLKNNLSISASNLHAEPCD
RTANVTSSQKKGSNSGKEMSAVGAQCISKSEEPGSQHSPKSQSDKNEEASSAAQYVKTSE
TFEQKCDSLHEEMSSVEQQLQPEAVPTDTLSQVSKKRLKKSIQKVNDWFSKSSEVLSCSP
QDDGAADIEEGGSCLSDRDSFISEKTDIMVNCLEVAMECENEKSLSKPSVHSIENKIFGK
TYQRGRKSNRHVNLGVVPQNTEVEEVPSDVQHLDNSRTDRLKRKRKTLCGLQPGDFIKKR
DAKVVDEPDCLVAARGKAGEDSSVVGGDPVCEKKGENTSAELPLKKGEFIFKNDVQKVIG
DCTDGEPELKVCDQRNAKKGRSSLTERNRHSARTKHTLQLVVNRNSSSPHQTELQIDSYP
SSEESKKIDSEQRQVRRSRRLQLLTGEMTKETRRRDEPNETSRKQANKNESFSSGFQRAV
LVNAPECKDQVEQQDILNHSVPLSDCNLKGTSLEASKVHASPETSFTIMGIEKDFSDPSL
LQLQEANACSLLASADTQGSHSLLQPCSTNVEETAGPVLNSPETKQCTAPEPDKSKLHAC
SPKDNGCYTGYDPESFKNQKMTEAKSILELNTETEDSELDVQYLRNMFRHTKRLSFTFHS
GLVKESAIENTASEAEGKMSTTQIEYRYNSRDLKNDPLHLKKPSVGLTGVSERESKTCQT
AKDVSGNDTECRHIREHGANASQVQSQEQFLSSARLFGAKIKHKSRLQKRKQSAEKTVSS
EIVRESELNLDLNQYNGSLSDRNNTEEPIFQGTGLSIINGTGSSSESNQAEKNEVAENKQ
PVLNVQPESMLNCLAVCQQSPAEFSCKISEKKCSEGKGKQVKSDKEQINQVANMWVPDCL
ISEEALEQPIEDTSGFPALSEMPDDLVFSAEDLKGNNSFCDADRKNISAVFVKTDENALV
RDINSDSSSSKSRSQTFVRRSRRAVQKLQSSEEESNEDEDLPCFQELIFGKSSSTHTQSQ
KQKTSVRRSSNPSAQILALQSSSSGSDKVVQKMPEATLKEVCVSPSQESECSVNLFSSQS
NMSEDSANRPEDLRLVLSTKEKKNFSEGKEASPHENEELKGRKNPLQDEHQGDPNLESNI
GEPSAYDSEASHLGDSYGLSTQSEILTTQQKNDMQNNLKKLQQEMAVLEAVLEQHGSQDS
ELPCSSVEGATATGLMRTARGAMLTSEADLDNHKTGSSVGLPPDEFHGMPSHCFNSNSKG
LEEEGSSASLLSTSKSHLLNKEAWQHSFPKTLALEPNTPSQEGKSQQGDAALLLVQEAEE
QCNQYRKEPENTTEQKSGTKLNSAAILTSPCGNMSRIPNSSPLKFLKRPSHSQTAEATNG
SAIPSNIDDRKNTQRCELEKRAFASTHVPHHRAGKENAKSPVVLSRKKMSIVASGLNQHE
LLLVQKFAWKTQSTLSNQITEGTTHVIMKTDMDLVCERTLKYFLGIAGRKWVVSYQWVIQ
SFKEGRILYESDFEVRGDVINGRNHQGPKRARQSQAGKLFKDFEICCYGPFTDMNTENLE
WMVELCGASVVTQLHLFTHKAKHAAVVVVQPDAWMEDAGYRAIQQKCSATVVTREWVLDS
VACYERQEFDAYLVSQE
NT seq 5634 nt   +upstreamnt  +downstreamnt
atggacttctctgtggttgctcttggagatgtgcaaaatgtactttcagctatgcagaag
aatttggaatgtccaatatgtttggaagtgatgaaagagccagtctcaacaaaatgtgac
cacatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaacagtctggta
cagtgtccaatgtgtaaaactgaagttaccaaaagaagtcttcaggaaaatcccagattt
aagcaactaattgaaggactgttgaaaactatccatgcttttgaacttgatgctggagtg
aagtttttaaaccatcaggatttttctaaaaaacccatagaaaccagttctgctgacacc
ctccgtaaagaaagttgtgtcatccaaagtaagggctaccgaaacagacaaaaaaaagtt
aaagaaaatggacaagcaaatcttaccctgcagggaactatcactggtgtacagctttca
ggcgacatggttaagtggagttccccaagaaacaaaaagagaaaactggactctgataaa
ataatgtacattgaatttggttctgattcttccgaagatctctttaaaaaggcaggtggt
agcagggctcaagacaaagaaatgtttcagactccacctgaaaagcttgaagaactgaag
tatgctgagaatgaaagtgaaagtccacacaacgtgcaagttaccaacctaggtggaaga
gaaatacttctttcagacttcagaggtgaatgtgatttctcagaggaaggcttaggaagc
agtgaagacattcaaaatatcagtgaagacttccaagctgctcaagtgaatttgtctgaa
gagcgtttaaagaataatctctccatttctgcctcaaacttgcatgcagagccatgtgac
agaacagccaatgttacatcatcacagaaaaagggcagtaacagtggaaaagaaatgagt
gcagtgggagctcagtgcatcagtaaaagtgaagagcctggctcacagcacagccctaaa
agccaatcagataaaaacgaggaagccagtagtgctgcacagtatgtaaaaacttctgaa
acatttgaacaaaagtgtgactccttacatgaagaaatgtcttctgtggagcagcagctg
cagcctgaagctgtgcccactgatactttgagccaagtttctaagaaaagactgaagaaa
agcattcagaaagtcaatgattggttttcaaaaagcagtgaggtgctctcttgttcccct
caggatgatggagcagctgacatagaagagggaggttcatgtttgtcagacagagattcc
tttatttcggagaagactgacataatggtaaactgcttggaagttgcaatggaatgtgaa
aatgaaaagagtttatcaaaacccagtgtgcatagcattgaaaataaaatatttgggaaa
acttatcagagaggtagaaagtctaatcggcatgttaatcttggagtggtaccccagaat
acagaagtggaagaagttccttctgatgtgcagcacttggataattccagaactgacaga
ttaaagcgaaaaagaaagactctctgtggcctgcaacctggagacttcatcaagaaaaga
gatgcaaaggttgtagatgagcctgattgccttgttgctgcaaggggaaaagctggtgaa
gattcttctgttgttgggggagatccagtttgtgagaaaaaaggggaaaatacttcagca
gaacttcctctcaagaaaggagaattcatctttaaaaatgatgttcaaaaggtaattggt
gactgcactgatggagagccagaattaaaggtctgtgaccaaaggaatgctaaaaaagga
cgtagttctctaacggagagaaacagacattcggccagaaccaagcatactctacagctg
gtagtgaacagaaactcaagttctcctcatcagactgagctgcagattgatagctaccca
agtagtgaagaatcaaaaaaaattgattctgaacagagacaagttaggcgcagcagaagg
cttcagttactgactggggaaatgacaaaagaaaccaggagaagagatgagccaaatgag
acatcaagaaagcaagccaataaaaatgaaagtttttcttctggattccagagggctgtc
ttggtcaatgcccctgaatgcaaagaccaggttgaacagcaggatatattaaaccatagc
gtacctttgtcagactgtaatttgaaaggtaccagtcttgaagcaagcaaggtacacgct
agtcctgaaacctcttttaccattatgggaattgaaaaagatttctcagatccctcacta
ctacaacttcaggaagcaaatgcttgttctctgttggccagtgcagacactcaaggcagc
cactcactcctgcagccatgttccacgaatgttgaggaaactgctggtccagtactaaac
tcacctgaaactaagcagtgcacagctccagaacccgacaagagcaagttacatgcttgt
tcacccaaggataatggatgctatacaggatatgatccagaaagcttcaaaaaccaaaag
atgactgaagcaaaaagcattttagagttaaacacagaaactgaagatagtgagctagat
gtacagtacctccgtaatatgtttagacatacaaaacgattgtcgtttacttttcattct
ggtctagtgaaggaatctgcaatagaaaacactgcttctgaagctgaagggaagatgagt
actacccagatagaatacagatataacagcagagatttaaaaaatgatcctctgcattta
aaaaaaccatctgtaggtctgactggagtcagtgagagagagtctaaaacctgccaaaca
gctaaagatgtctctggaaatgatactgaatgcagacacattagggagcatggtgcaaac
gcttcacaagtacaaagtcaagaacaatttttatcttcagcgaggttatttggtgccaaa
attaaacataagagcagattgcaaaaaagaaaacagtcagctgaaaagacagtgtcctct
gaaatagtgagagaaagtgagttaaatttggacctaaaccaatataatggaagtctaagt
gatcggaataatacagaagagcccattttccaaggaactggtttaagcataattaacgga
acaggctccagttcagaaagcaatcaagcagaaaaaaatgaagtagctgaaaacaaacag
ccagtattaaatgttcagcctgaatctatgctgaattgtctagcagtttgtcaacaaagt
cctgctgaatttagttgcaaaatctcggaaaagaaatgcagtgaggggaaaggcaaacaa
gtaaagagtgataaagaacaaataaaccaagttgccaacatgtgggtacctgactgttta
atttcagaagaagctctggagcaacccatagaggacaccagtggttttccagcactgtct
gagatgcctgatgacttagtgttttctgctgaagaccttaaaggtaataacagcttttgt
gatgctgataggaaaaacatttctgctgtgtttgttaaaacagatgagaatgcactggta
agagacatcaatagtgacagcagtagctctaagtctaggtctcagacctttgttcggaga
tctcgaagagcggtgcagaaactgcagtcctctgaagaggagtctaatgaggatgaagac
ttaccatgttttcaggaattaatatttggcaagtcatcaagcacacacactcaatcccaa
aaacagaagacgtctgtgagaagatcttcaaatccctcagcacagattttagcactgcaa
agtagcagcagtggcagtgacaaagttgtacagaagatgcctgaggccaccttaaaagag
gtgtgtgtttctccaagccaagaatcagaatgctctgttaacttattttcttcccagtcc
aacatgtcagaagattcagctaacagaccagaagacctgaggctagtccttagtaccaaa
gagaagaaaaacttcagtgaaggcaaagaagctagtccacatgaaaatgaagagctgaaa
ggaagaaaaaatcctttgcaagatgaacaccagggggacccaaatttggaatcaaatata
ggcgagccatctgcatatgatagtgaagccagtcatctgggggattcatatggattatcc
actcaaagcgagattcttactacacagcagaaaaatgacatgcaaaacaacttaaaaaaa
cttcagcaggaaatggctgtgcttgaagcagtgctagaacagcatggaagtcaggactct
gaattgccatgttccagtgtggaaggagcaactgcaacgggactgatgagaacagcaaga
ggagcaatgttaacttcagaagcagatcttgacaatcacaaaaccggtagttcagtagga
cttccacctgatgaattccatggaatgccaagtcattgtttcaacagtaacagcaaagga
ctagaagaggaagggtcttcagcttcacttctttccacctctaaatctcatttattgaat
aaggaagcttggcaacatagctttccaaagactcttgcactggaacccaacactccttct
caggaaggaaagtcccaacaaggtgatgcggcactgctgctagtacaagaggcagaggaa
cagtgtaaccagtacaggaaagaaccagaaaatacaacagagcagaagtctggaacaaaa
ctaaacagtgctgctatcctcaccagtccttgtggaaacatgagcaggattccaaacagc
tcccccttaaagtttcttaaaaggccttcccacagccaaactgcagaagcaacgaatggt
tctgccataccttccaatattgatgataggaagaatactcagcgatgtgaactggagaag
agagcatttgcctctacacatgttccacaccatagagctggaaaagaaaatgccaaaagc
ccagttgtgctcagcaggaaaaaaatgtcaatcgtagcatcgggtctcaaccagcatgaa
cttttactggtgcagaagtttgcctggaaaacccagagcactttatctaatcaaatcact
gaaggaacaacccatgtcataatgaaaacagatatggatctagtgtgtgagcgtacacta
aagtactttctgggcatcgcaggaagaaaatgggtagttagctatcagtgggttattcag
tcttttaaggaaggaagaatactttatgagtctgactttgaagtgagaggagatgtgatc
aatgggagaaaccaccaaggtcctaagagagctagacagtcccaggctggaaagctcttc
aaagactttgagatctgctgctatgggcctttcacggatatgaacacagaaaatttagag
tggatggtagagctttgtggtgcctctgtggtgactcagcttcatctattcactcataag
gcaaaacatgctgcagtagtcgttgtgcagccagatgcttggatggaagacgcaggctac
agagcaattcagcagaagtgcagtgctactgtggtgacccgagagtgggtgttagacagt
gttgcatgctatgagcgccaggagtttgatgcctaccttgtgtcccaggaataa

DBGET integrated database retrieval system