KEGG   Gavialis gangeticus (Gharial): 109289966
Entry
109289966         CDS       T07453                                 
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn04517  IgSF CAM signaling
ggn04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109289966 (RAPGEF6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109289966 (RAPGEF6)
SSDB
Motif
Pfam: RasGEF RasGEF_N RA PDZ cNMP_binding PDZ_6 RA_2 PDZ_2
Other DBs
NCBI-GeneID: 109289966
NCBI-ProteinID: XP_019361851
LinkDB
Position
Unknown
AA seq 1658 aa
MGSAMDPKVQQALRKKSSERSREDLNIIYTYLHGMDILSHLREQQLRIMSSSARYERYKG
NQVLFCSETIARCWYILLSGSVLMKDSMFLPPCSFGKQSGGKRGCECIVLEPSEMIVVEN
SKDNEENILQREIPIRQSRRRFRKINQRGERQTITDHVDASSYLSLPADLTKMQIADNPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLTGLPEAPVDSEDEEEEEDED
IDRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIF
EVVEQAGAIILEDGQELDSWYVILNGTVEISYPDGKTENLCMGNSFGITPSLEKQYMNGV
VRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIK
ATPERLITHLIEEHSIVDPTYIEDFLLTYRTFLSSPLEVGDKLLEWFEVDSLRDKVTRVV
LLWVNNHFNDFEGDPAMTRFLEEFEKNLENTKMKGHLRLLNIACAAKAKWRQITLQKASR
DSPLFFSLLGGSEKGFGIFVETVEAGSKAAEVGLKRGDQIMEVNGQNFENITFVKALEIL
RNNTHLSITVKTNIFVFKELLSRIGQEKNGVPHIPKIAEKKNNRYSIPDMPGDMEQIFPR
EKGNKKLKANTVSGGRNRIKKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLA
IMPVPGTLSSSSPDLLQPTTSILDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTT
AKEVVSHAVHEFNLTGASETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKN
NMETETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLFKLD
SKTGNAHLKQFEDVINQETFWVATEILTEPNQLKRMKIIKHFIKIALHCRECKNFNSMFA
VISGLNLASVARLRGTWEKLPSKYEKHFRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPL
FPVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVIRMTSANMDPAVMFRQRKKRWR
SLGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDE
EKFQIMSLQCEPAYSTLTKNLSERRGGKSSEMSPIPLRSVGQTTKVQQHQQNRMSQVLQV
PAVNLHPIRKKGPAKDHVTFSSPQKSLSLSEEVSKKQAEDAVSVASSLHSSPLASPQGSP
RKVGNIQRSDNCSQMNLSGSSSSLASETSNKNSGQRSYGIGYALIPSAKSDNFSDSSHSE
ISSRSSIVSNCSVDSMSAALQDERGLPQSLNVVDSVGPERKEHPPPLAEYSQPCPGWPLP
RPAIIRGLAVTSSMSNEEISHEHITIEAADSGRGSWTSCSSSSHDNFQNIQIQKSWDLLN
SYRHAHLDGPIAEVEPTNCYPEEAYLYSEAFSKNNRQSKTSMELDQSRQSWASSSSLSDT
YETNYGTIKRRGLENSTMEQTEILDSKPGTDATYKTVTSSTEKGLIVYCVTSPKKDDRYR
EPPPTPPGYMGISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLSSASLSSEPVA
CISSKMPQWHTRQPSHPKLTDMTDADSEEDEDEQVSAV
NT seq 4977 nt   +upstreamnt  +downstreamnt
atgggctccgccatggaccccaaggtccaacaggccctgcggaagaagtcctcggagcgg
agccgcgaggacttaaatattatctatacttatcttcatggaatggacatattgtcacat
ctcagggaacagcagctaagaataatgtcttcaagtgcccgctatgaaagatacaaggga
aaccaagttctcttttgctcagaaacaatcgccagatgttggtacattcttctttccgga
tctgtgcttatgaaagactccatgtttttaccaccatgcagttttggcaagcagtctgga
ggcaagagaggatgcgagtgtattgtactggaaccttctgaaatgattgtggtggagaac
tccaaagacaatgaagaaaatatcttgcaaagagaaattcccatcagacagtctcggcga
aggttcaggaagattaatcaacggggagagcgccagaccatcactgaccatgtggatgct
agcagttatctttcgcttccagcagatcttaccaagatgcagattgcagacaatccacat
ccacaggtgactcatgtcccttccagccagtctggatgtagcattgccagtgactctggg
agcagcagcttgtctgatatatatcaggctacagaaagtgagatgggagatgtagattta
acaggactcccagaagcacctgtggactctgaagatgaagaggaggaggaagatgaagat
attgacagaacttcagatccattattaggacgagacgttgtacgagagtgccttgaaaaa
gaacctgcagataaaacggatgatgacattgagcaattactggaatttatgcatcagctc
ccagcttttgcaaacatgaccatgtctgtgagaagagagctttgttcagttatgatattt
gaagtggtagaacaagcgggagccatcatactggaagacggacaagaacttgattcttgg
tatgtcattttaaatggcactgtggagatcagctatccagatgggaaaactgaaaatctc
tgtatgggaaatagttttgggattactccttctctggaaaaacagtatatgaatggagtg
gttagaaccaaagtagatgactgtcagtttgtatgcatagcccagcaagattactggcgc
attctgaaccatgtggaaaaaaacactcataaagttgaggaagaaggagaaattgttatg
gtaaaggagcacagagagctggatcgcagtggaaccaggaaaggacacatagttattaag
gcaacacctgagcgactcatcacacatttaatagaagagcattccatcgttgatccaact
tacatagaagacttccttttaacatacagaacatttctctcaagccccttggaagttggg
gataagctcttggagtggtttgaagtagatagcctcagggataaggttaccagagtggtc
ttattgtgggtaaacaatcattttaatgattttgaaggagatcctgctatgacgcgtttt
ctggaagaatttgaaaaaaacttggaaaatacgaaaatgaaggggcacctcaggttgttg
aatattgcttgtgctgccaaggcaaaatggaggcaaattaccctgcagaaggcttccaga
gactcgcctctgtttttcagcctcctgggaggaagcgagaagggttttggtatatttgta
gagactgtagaagcaggcagcaaagcagcagaagttgggctgaagcgtggcgatcagata
atggaagtaaatgggcagaactttgagaacattacgtttgtgaaagcccttgaaatcttg
aggaacaatactcatctttccattacagtaaagacaaacatttttgtatttaaggagctg
cttagccggataggccaggagaaaaacggagtcccacatattccaaaaattgcagaaaag
aaaaataaccgttactccatcccagatatgccaggagacatggaacagatatttccgcgt
gagaaaggaaacaaaaaactgaaagcaaacactgtatccggtggaagaaataggatcaag
aaaattttagacaagactcgtttcagcattttgcccccaaaactatttagtgatggcagt
gtaagtcaatcccaggatgacagcattgttggaacaaggcagtgcagacacagcctggcc
atcatgcctgtccctggaacactttcatctagcagcccggacctgttgcaacctacaacc
agcattcttgatttttctaatccttcagctgttggtttttactatattccagatcaagtt
attagagttttcaaagcagatcaacagagttgttacattatcatcagcaaagacactaca
gcgaaagaagttgtgagtcatgctgtgcatgaattcaacttgacaggtgcatcagagacc
tactctctctgtgaggtgtctgttagtcctgagggagtcatcaaacaaagaaggcttcca
gatcagttctcaaaattagcagacaggattcagctcaatggaaggtattatctgaaaaac
aatatggaaacagagaccttatgctcagatgaagatgcccaagagctgctcagagagagt
caaatatctcttcttcagctgagcaccattgaagtggcaactcagctttcaatgagagac
ttcgaattatttcgcaacattgagcctactgaatacattgatgacctttttaagctggac
tcgaaaacaggaaatgctcacctgaaacaatttgaggatgtcattaaccaagagacattt
tgggttgccacagaaattttaacagagcccaaccagctcaaaagaatgaaaattattaaa
catttcattaaaattgccctccactgtcgagaatgcaagaacttcaattccatgtttgca
gttataagtgggctaaatctggcatcggtagcacgactcagaggtacctgggaaaaatta
ccaagcaagtatgaaaagcatttcagagaccttcaggatctttttgatccatctagaaac
atggcaaaataccgcaacattcttagcagtcagagcatgcagcctccaattattccactc
ttccctgttgtcaagaaagatattacatttctacatgaaggaaatgattccaaagtggac
ggcctggtaaattttgagaagctcagaatgattgccaaagaaatccgacaagttatcaga
atgacctctgctaacatggatccagccgtaatgttcaggcaaaggaagaagaggtggagg
agtttggggtctctgagccagggcagcacaaactcaaatatgctcgatgttcaaggaggt
gctcacaaaaaacgtgcccgacgcagttcgctccttaatgccaagaagctatatgaggat
gcccagatggccagaaaggtgaagcagtacctgtccaacctgaatgtagaaactgatgag
gaaaaattccagatcatgtcgcttcagtgcgagcctgcgtatagcactttgacaaagaat
ttaagtgagagaagaggtgggaaatcctcagaaatgtctccaatacccttgaggtcagtt
ggccaaaccacaaaagttcagcagcatcagcaaaacaggatgagccaagttcttcaagtt
cctgctgttaatttgcatcccattagaaaaaagggaccagcaaaggaccatgtcacgttt
agttctcctcagaagtccttaagtttgtcagaggaagtaagtaagaaacaagcagaagat
gctgtgtctgtggcatcttctttgcactccagtcctcttgcatctcctcagggctctcca
cgcaaagttggtaacatccagaggtctgataattgcagtcagatgaatctctctggatcc
tcttcatcacttgccagtgaaaccagtaacaagaacagtgggcaacgcagctatggaata
ggctatgctctcataccttctgccaagtcggataatttctcagactccagccacagcgag
atctcctcgcggtccagcatagtgagcaactgctctgtcgactccatgtctgcagcccta
caggacgagaggggtttgccccagtctcttaatgtcgtggattcggtgggaccagaaaga
aaagaacatcctccaccattggctgagtacagtcagccttgcccaggttggcccctacct
agaccggctataatcagaggattggctgtcacatcgtccatgagcaacgaggagatctcc
catgaacatattacaatagaagcagcagacagtggccgtggaagctggacttcatgttca
agtagttctcatgataacttccagaatatccaaattcagaaaagctgggatctcttgaat
tcttaccgccacgctcacttggatggacctattgctgaagtagaacccacaaactgttac
cctgaagaggcgtatttgtattccgaagccttttccaaaaataataggcagtccaaaacc
agcatggaattggatcagtcccggcagagctgggcctcctctagctctctgtcagacacg
tatgaaacaaactatgggacgattaagcggagagggctggagaactcaacaatggagcag
actgagattttggactctaaaccaggcactgatgcaacttataaaactgttacttctagt
acagaaaagggcctaatagtgtactgtgtcacctcacctaagaaggacgataggtatagg
gagccaccgcccacccctccgggatatatggggatttctttagcggacataaaggaagga
tcaccccaccacccacacttaaaacctccagactatagtgtggcagtgcagaggtcaaag
atgctacatagtgacctctctagactttcatcagcttctctcagtagtgaaccagtggcc
tgtatttcatcgaagatgcctcagtggcatacccggcagccgtcccatcctaaactaaca
gatatgactgacgcagatagtgaagaggatgaagatgaacaagtatcagcagtctaa

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