Gavialis gangeticus (Gharial): 109294362
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Entry
109294362 CDS
T07453
Symbol
SMCR8
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109294362 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109294362 (SMCR8)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
109294362 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
eRF1_3
Motif
Other DBs
NCBI-GeneID:
109294362
NCBI-ProteinID:
XP_019368223
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MISAPDVVAFTKEEELEEEAYDEPPLPEEYSVPLYPFATYGANPWSKLSGSKFPRDFILI
SEFSEQVGPQPLLTIPDDTKVSGTFDLNYFSLRIMSVDYQASFVGHPPGCAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISTDEHKIMQQFQELSAEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KLIIEHQDLLKQIRSYPYRKLKDSDFHPYEPECAPDQANASFDLDSTTSHHDEPGETHVY
ARLPPYTPKLIKAKSAKCFDKKLKTLEELCDIYFFTQTLDQLNQIERTFRGDVCYLLTNQ
INRALLKQQTIVNFLFEDVSVLDEKPAEKHPVGCQGCPQDTLNTKSLEEFPIPKVLISLG
SYKSSVESVPIKMDPEMEDPQELKVSDPPAEDHQENLEYLDADIKGSISSGESIEVLGTE
KSASVLTKSESQASLPISSSPHMVRNKAVSGRTISEDSIEVLSTCPSESLIPEDFKASYP
SAINEETYADEEEGGIHFSPSLSPDNFEEREGRSEQEHLLQVDSACCIGKESPSFLEPLP
DLGRKHCDDDGVVSIPPQPYRQADQGLHVNFSDYLSHDGVPGGLLSYEPNSHYLLNSRDV
SKISLDECSDSTSYMSSAASTCSDRTPSPAHPISHFSERHKKKAGQNALRFIRQYPFAHP
AIYSLLSGRTLVVLGEDEAIVKKLVTALSIFVPNCSAYTKPVKHWVTSPLHIVDFQKWKL
IGLQRVGSPAGASMLHSLTRYSRYVSILDADSKTLRCPLYKGTLVPRLADHRTQIKRGST
YYMQVQGALTQLCSKAFLYAFCHHLHLPINEAEAEESIASRRMNFLKLQLGLVNEDIKIV
QYLAELLKLQYLQEPGRGATPQLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccccgacgtagtggccttcaccaaagaggaggagttggaggaggaggcg
tacgacgagccgcctctgcctgaggaatactccgtgcccctctaccccttcgccacctat
ggtgccaatccctggtccaagctctcgggctccaagttcccccgggacttcatcctcatc
tccgagttctccgaacaagtgggaccccagcccttgctgaccatcccagatgacaccaaa
gtgtccggtacgtttgatctcaattatttctccctccgcatcatgtctgtggattatcag
gcctcctttgtggggcacccgccagggtgcgcctacccaaagttgaactttgtggaggac
tccaaagtggtcctgggagattcaaaagaaggagcttttgcctacgtgcaccacctgact
ctctatgaccttgaagcaaggggctttgtgaggcctttctgcatggcctacatttccacc
gatgagcacaaaatcatgcagcagttccaggagctctctgcagagttctccaaagcctct
gagtgcttaaagacaggtaacaggaaagcttttgctaatgaacttgaaaagaagctgaaa
gaccttgactatactaggactgtgctgcacaatgaaacggagattcagaagaaagccaat
gacaaagggtattacactacccaggctatcgagaaagcgaacgaactagccagtgtcgaa
aaattgattattgagcaccaagacttgctgaagcaaatcaggtcatatccttatcgaaaa
ctgaaggattctgatttccatccatacgagccagagtgtgccccggatcaagcgaatgca
agttttgatctggactcaactacctcccaccatgatgagcctggtgaaacgcatgtatat
gcacggttgccaccctacacccctaagctcatcaaagcaaagtctgccaaatgttttgac
aagaaactaaaaaccctggaggagctctgtgacatttattttttcacccaaactctcgat
cagctgaatcagatagagcgaactttcagaggtgatgtctgctacctcttgacaaatcag
atcaacagagcacttttaaagcagcaaactatagtaaacttcctgtttgaagatgtgtct
gtcctagatgagaagccagctgaaaaacaccctgttggttgtcagggttgtcctcaggac
actctcaacaccaagagtttagaagagtttcccatcccaaaagtgctgatcagcctggga
tcttacaagtcaagtgtggagtctgtgcccatcaagatggatccagagatggaagatcct
caggagctaaaagtgagcgatcctcctgctgaggaccaccaggaaaacttggagtacctg
gatgcagatattaaagggagcatcagcagtggggagagcatcgaggttttgggaacagaa
aagtctgcttctgttctgaccaaatctgagagccaggccagcttgcccatcagttcaagc
ccccacatggttagaaacaaagcagtcagcggaagaaccatcagtgaggacagcattgaa
gtcctgagcacgtgtccctcagaatctctgattccggaagattttaaagcaagctaccca
agtgccattaatgaggaaacttatgcagatgaggaagagggaggtattcacttcagccca
agtttaagtcctgataattttgaagagagggaaggcaggtcagaacaggagcacttgctg
caggtggattctgcctgttgtattgggaaagagagtcctagcttcctagagcctctgcct
gacctgggacgaaagcactgtgatgacgatggtgtggtcagcattcccccgcagccatac
aggcaggcagaccagggccttcacgtgaacttctcagactacttgtcccacgatggtgtc
cctgggggactcctctcgtacgaacccaattcccattacttactgaacagccgagatgtc
agtaaaattagcttggatgaatgctctgactccacaagctacatgagcagcgcagcttcc
acgtgctctgatcggactccttctcctgcccatcctatcagtcacttcagcgaaaggcac
aaaaaaaaagccggccagaatgccttgaggttcattaggcaatacccctttgctcaccct
gctatatactctctgctcagcgggaggacactggtagtcctgggagaagacgaagcaata
gtaaagaaactggtcactgctctttccatcttcgttccaaattgcagcgcatacaccaag
cccgtgaagcactgggtcacttcccctttgcatattgtggatttccagaagtggaagctg
attgggctgcagagagtggggtcccctgctggagctagcatgctgcactccctgactcgc
tacagccgctatgtgagcatcctggatgccgacagcaagactctgcgctgccccctttac
aaggggacgctggtgccccggctggctgaccaccgcacacagatcaagcggggaagcacc
tactacatgcaagttcaaggcgccctcacccagctgtgctcaaaagccttcctgtatgcc
ttctgccaccacctgcacttgcccatcaatgaggcggaggcagaggagtccatcgcgagc
cgccgcatgaacttcctgaaactccagctagggttggtgaatgaagacatcaaaattgtg
cagtacctggcagagctgctgaaactgcagtaccttcaggagcctggcaggggtgccacc
ccccagctgcggtttgactacgtccccagctttttgtacaaaatctaa
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