Gavialis gangeticus (Gharial): 109294538
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Entry
109294538 CDS
T07453
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn00514
Other types of O-glycan biosynthesis
ggn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109294538 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109294538 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ggn01003
]
109294538 (LFNG)
Enzymes [BR:
ggn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
109294538 (LFNG)
Glycosyltransferases [BR:
ggn01003
]
Glycan extension
O-Glycan
109294538 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
109294538
NCBI-ProteinID:
XP_019368512
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MTFIFTDGEDEELKKRTKNVINTNCSAAHSRQALSCKMAVEYDKFIESGRKWFCHVDDDN
YVNVQMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFATGGAGFCISR
GLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPK
TEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSIHCLLYPDTPWCPVNVVY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcatcttcaccgatggggaggatgaggaactgaagaagcgaacaaaaaatgtc
attaacaccaactgctcagcagcccacagccgccaggcattgtcttgcaagatggccgtg
gagtacgacaagttcattgagtcgggaagaaagtggttttgccacgtggatgatgacaac
tacgtaaatgtccaaatgctggtgaagctgctgtccagctatccccacacacaggacatc
tacattggcaaacccagcctggaccggcccattcaagccacagagaggatcagcgagaac
aagatgcaccctgtccatttctggtttgccacgggaggagcaggcttctgtatcagccgt
gggctggccttgaagatgagcccatgggccagcggggggcacttcatgaacacagcagag
aagatccgtctgccagatgattgcaccattggctacatcattgagtccgtgctaggcgtg
aaacttatccggagcaatctcttccactcccacctggagaacctccaccaggtgcccaag
acagagattcacaagcaggtgacactgagctacggcatgtttgaaaacaagaggaattcc
atccacatgaagggtgctttctctgtagaggaggatccatcgaggttccgctccattcac
tgcttgctgtacccagacaccccgtggtgcccagtgaatgttgtttactag
DBGET
integrated database retrieval system
