KEGG   Gavialis gangeticus (Gharial): 109295891
Entry
109295891         CDS       T07453                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn04115  p53 signaling pathway
ggn04210  Apoptosis
ggn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109295891 (APAF1)
   04115 p53 signaling pathway
    109295891 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109295891 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz NB-ARC APAF1_C Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 APAF-1-like_WHD WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT122_1st CARD WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_like Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_IFT140_1st RMC1_N Beta-prop_NUP159_NUP214 eIF2A CARD_2 Ge1_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 PEP5_VPS11_N WD40_RFWD3 AAA_16 Beta-prop_Nup120_160 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 109295891
NCBI-ProteinID: XP_019370564
LinkDB
Position
Unknown
AA seq 1248 aa
MNVKSRNHLVLNRLALERDIQTSYIMDHMISDQVLTLQEEEKVKAQATRQDRAAMLISII
LKKDNNSYISFYNALLHEGYKDLAALLHDGIPSITSYDRKNSTDGVAFCVRTILCEGGVP
QRPVVFVTRPELVNEIRQKLYNLRGDPGWVTVYGMAGSGKSVLTAEALRDERLLEECFPG
GVHWISVGKQDDAGLLMKLQNLCSRLDLDFTYAQRPPLNIGEAKDRLRLLILHKYPRSLL
VLDDIWDSQTLAAFDNHCKVLITSRDRSVTDHVTGKKYEVHMESGLSNEKGLEILSLFVD
MKINDMPAQADKIVRECKGSPLVLSLIGALLRDFPNRWEYYLRQLQNKQFKRIKKSSSYD
YEALDEAMSISVEMLNENFKDFYKDLSILPKDVKVPTKVFCILWDMEPEEVEDIQQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLIEKNREQLQELHEKIVKQYKKHYRLCIPTPGEEDC
MYWYNFLAFHMASAKMQEELCDLMFSLDWIKAKTELVGPAHLIHEYVEYSYILDQKNSLA
RGNFQKFLSLNGHLLGRQPFPDILQLGLCQPETSEVYQQAKLKAQREVDKGAFYVEWINK
GMKNLSRLVVRPHTDAVYHACFSQDGQKIASCGADRTVQVFKAETGEKLQSVEAHDDEVL
YCALSPDGRFIATCSADNKAKIWCLRTGQSIYDCEEHTEQVNCCHFNSGNNKLLLTTCSN
DSLLKLWDVRKKHCQNTMFGHTSSVNHCRFSPDDKYVASCSADGTVKLWDTSSGNELKCI
KIKDFFRNADELEVEVLPKCCSWSTDSATVMVAAKNKLLLLDVETSDLLEEVLSYQNAIQ
YYDFCPSNQLVAVVLSHYFVELWNTKTKTKVADCREHMSWVYCVTFSPDGSLFLTSSDDQ
TIRIWETSKVCKPPEIALKSELDVAFQGDEVMILGILNRTHLQLINGNTGHTVSLTDVEE
SISCCCLSEDLQFAAFGQENGTVKVLEVSGGRVLKSRRGHKTSVQHCLFTSDGQTLISSD
VDDPIIQVWNWELEECLFLEGHNETIKNFRLLENSRLLSWSFDGTVKVWNIVSGKIEVNF
ACHKDTVLSCAVSPDATKFSSTSVDKTAKIWSFKSSSILHELKGHEACVRCCTFSFDNKL
LATGDDKREIRIWDVSSGELLHLCSPVTVDEGGPTHDYWVTDLCFSPDSKMLVSSGGYLK
WWNAVTGESLQTFYTNGTNLQSIYVSSNFKIFVTVDNLGILYVLQMME
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgaatgtgaagagtcgaaaccatttggttctaaaccggttagcgttggaaagagacatc
caaacctcttatattatggatcatatgattagtgatcaagtactaacattacaggaagag
gagaaagttaaagcacaggctacacggcaggaccgagcagctatgctaataagcattatt
cttaaaaaagataacaactcatacatatctttctataatgcactgcttcatgaagggtac
aaggatcttgcagctcttctccatgatggcatcccaagtatcacctcttacgatagaaag
aactctacagatggagtagccttttgtgtgaggacaatcctctgtgaaggtggagtgcca
cagagaccagttgtgtttgttactcgtccagaactggtaaatgaaattagacagaaacta
tacaacttaagaggtgatccaggttgggttactgtttatggaatggcaggttctgggaag
tctgtcttaacagctgaggcactaagagatgaaagactcttggaagagtgctttcccgga
ggagtacattggatttctgttggaaaacaggacgatgcagggcttctaatgaaacttcag
aatctttgtagtagattagatctggacttcacttatgcacaaaggccaccgcttaatatt
ggagaggctaaagaccgtcttcgtctgctgatactacataaataccccaggtctctcttg
gtcctggatgacatttgggattctcagacattagcggcttttgataatcattgtaaagtt
cttattaccagcagggataggagtgtgacagatcatgtgactggcaagaaatatgaagtt
cacatggaaagtggattgagtaatgagaaaggacttgaaattttatctctctttgttgat
atgaaaataaatgatatgcctgcccaagctgataaaattgtaagagaatgcaaaggttcg
cctcttgtgttatcattgataggcgcattattacgcgatttccccaatcgttgggaatat
tatctcagacagctgcagaataagcaatttaaaaggataaagaaatcttcttcttatgat
tatgaagcacttgatgaagcaatgtccataagtgttgaaatgctgaatgaaaactttaaa
gacttctataaagatctttctattcttccaaaggatgttaaagtgcctactaaggtgttc
tgtattctttgggatatggagcctgaagaagttgaagacatacagcaagaatttgtaaac
aaatctctcttattctgtgatcgtaatgggaaatcattccattattatttgcatgatctt
caacttgacttcctcatagagaagaatcgtgagcaacttcaggagctgcatgaaaagatt
gttaaacagtacaagaaacattatagattatgtatacctactccaggtgaagaggattgc
atgtactggtataactttttagcgttccacatggctagcgctaaaatgcaggaagaactg
tgtgatctcatgttttctctagattggattaaagccaaaacagaattagtaggacctgcc
catctgattcatgaatatgtagaatacagttatatactggatcaaaagaatagcctagca
cgtgggaactttcagaaatttctctctttaaatggacaccttcttggacgacagccattt
cctgatattctacaattagggctttgtcaaccagaaacctcagaagtatatcaacaagct
aaactaaaggcacaacgagaagttgataaaggagcattttatgtggaatggataaataaa
ggcatgaaaaacctctcccgtttggttgtccgaccacacacagatgcagtttaccatgcc
tgcttttcccaggatggacagaaaatagcttcttgtggagctgacagaacagtgcaggtg
tttaaagcagaaactggagagaaacttcagagtgtagaagctcatgatgatgaagtactt
tattgcgctctctctccagatggtagattcatagcaacttgttcagcagataacaaagcg
aagatctggtgtttaagaacaggccagagtatatatgactgtgaggaacatacagagcag
gtcaactgttgccattttaacagtggaaataataagcttctcctgactacctgctcaaat
gacagtttgctcaagctttgggatgtaagaaaaaagcattgtcaaaacacaatgtttggt
catacaagttctgtcaatcattgtagattttcaccagatgataaatatgtggctagttgc
tcagcagatggaacagtgaagctttgggacacaagctcaggaaatgaactgaaatgtatt
aagataaaggatttcttcagaaatgctgatgagctagaagtggaagtgttacccaagtgt
tgctcctggtcaacagatagtgctacagtaatggtggcagccaaaaataaacttcttctt
ttagatgttgaaaccagtgatttattagaagaggttttgagttaccaaaacgcaatccag
tactatgacttttgccccagcaatcaactggtagcagttgtcttgtcacactattttgtt
gagttgtggaatactaaaaccaagacaaaagtagctgactgcagggaacacatgagttgg
gtttactgtgtgacattttcccctgatggctctttatttctgacatcttctgatgaccag
acgataaggatttgggagacaagtaaagtgtgcaagcctccagaaattgcattgaaaagt
gaactagatgttgcattccagggcgatgaagtgatgattttaggaattctcaatcgtaca
catctacaactaattaatggaaacacaggccatactgtcagtctgactgatgtcgaggaa
tctatttcctgctgttgcctgagtgaagatcttcaatttgcagcatttggacaggagaat
ggaactgtaaaggttttagaggtgtcaggtgggagagttttgaaatctagacgtggacac
aagacctctgtacaacattgcctatttacctctgatggccagaccctcatttcaagtgat
gttgatgatccgattatacaggtgtggaattgggagttggaagaatgcttatttctagaa
ggtcacaatgaaacaatcaagaattttaggcttttggaaaattcacgtcttctttcttgg
tcatttgatggaacagttaaggtgtggaatattgtttctgggaaaatagaagtcaacttt
gcttgccataaagatactgttctctcttgtgccgtctctcctgatgccactaagttttca
tctacctctgttgataaaactgccaagatatggagcttcaaaagttcctccattcttcat
gagctaaagggtcatgaagcctgcgtgcgatgttgtactttttcatttgataacaaatta
ttggccactggagatgacaaaagggaaatacggatttgggatgtgtcaagcggtgaatta
cttcatctctgctcccccgtcactgtagatgaaggaggtccaacacatgattactgggtg
acagacctctgtttttctcctgacagtaagatgcttgtgtcttctggaggatatcttaag
tggtggaatgccgttactggagaatccttgcaaacattctacacaaatggaacaaatctc
caatcaatatatgtgtcctctaatttcaaaatatttgtgactgttgataaccttggtatc
ctttatgtactacagatgatggaatga

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