KEGG   Gavialis gangeticus (Gharial): 109295958
Entry
109295958         CDS       T07453                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03420  Nucleotide excision repair
ggn04110  Cell cycle
ggn04114  Oocyte meiosis
ggn04120  Ubiquitin mediated proteolysis
ggn04141  Protein processing in endoplasmic reticulum
ggn04310  Wnt signaling pathway
ggn04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109295958 (RBX1)
   04120 Ubiquitin mediated proteolysis
    109295958 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109295958 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109295958 (RBX1)
   04350 TGF-beta signaling pathway
    109295958 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109295958 (RBX1)
   04114 Oocyte meiosis
    109295958 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ggn04121]
    109295958 (RBX1)
   03400 DNA repair and recombination proteins [BR:ggn03400]
    109295958 (RBX1)
Enzymes [BR:ggn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109295958 (RBX1)
Ubiquitin system [BR:ggn04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109295958 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109295958 (RBX1)
   Cul2 complex
     109295958 (RBX1)
   Cul3 complex
     109295958 (RBX1)
   Cul4 complex
     109295958 (RBX1)
   Cul7 complex
     109295958 (RBX1)
   Cul8 complex
     109295958 (RBX1)
   Cul9 complex
     109295958 (RBX1)
DNA repair and recombination proteins [BR:ggn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109295958 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109295958 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 109295958
NCBI-ProteinID: XP_019370674
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggctgcagcaatggatgtggataccccaagcggcactaacagcggcgctggcaagaaa
cgcttcgaagtgaagaagtggaatgcagtagctctctgggcctgggacattgtggttgat
aactgtgccatttgcaggaaccatatcatggatctatgtatagaatgccaagctaaccag
gcatcagctacctctgaagagtgcactgttgcatggggtgtctgcaatcatgctttccac
tttcactgcatctctcgctggctcaagactcgccaggtgtgtccgttagacaacagagaa
tgggagttccaaaagtatgggcactag

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