Gavialis gangeticus (Gharial): 109296115
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Entry
109296115 CDS
T07453
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109296115 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109296115 (TDG)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
109296115 (TDG)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109296115 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
109296115
NCBI-ProteinID:
XP_019370892
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MEAEGSGRYYSPLQQAQTFYPFPFHQVITGAPNMEIMNEQQTLEEIPEPNFASEPTQEVT
RGRKRKTKSTEPKKPAAKATKSAKSKGKQEKITDAFKVKRKVDRFNGVSEAELLTKTLPD
ILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSKEQLNHMDDHTLPQKYG
IGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYQPRIAAFNGKCIYEIFSKEVFGVK
VKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGVAPNT
EVQEVEYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYSDGTVHESEQCNFSSDGTAS
SNPEYSGGSCFGDVPNGQWMTQSFTDQIPEFNNSRAQELEGSSV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgagggctcgggcaggtattattcgcctcttcaacaagcccaaactttttat
ccatttccattccatcaagtgataactggagctcctaacatggaaattatgaatgaacaa
caaactctggaggagattccagagccaaattttgcttcagaacctactcaagaagttaca
aggggcaggaagagaaaaaccaaatcaactgagcccaaaaagcctgctgccaaggcaact
aagtcagctaaatcaaaaggcaaacaagaaaagatcaccgatgcttttaaagtcaaaaga
aaagtggaccgttttaatggggtatctgaagctgaactgttaaccaagactctgcctgat
attttgaccttcaatctggacatcgtaataattggcataaacccaggcttgatggcagcc
tacaaagggcatcattaccctggacctggaaatcatttttggaagtgtcttttcatgtct
gggctgagtaaagaacaattgaaccatatggatgaccacactttaccacaaaaatacggt
attggatttacaaacatggtggagagaacaacaccaggtagcaaagacctctccagcaaa
gagtttcgggaaggagggcgaattctgatgcagaaattgcaaaaatatcaacctcgcata
gcagcttttaatggaaaatgtatttatgaaatttttagtaaagaagtgtttggagtaaaa
gttaaaaacttggaatttggattgcagccacacaaggtccccgatacagaaacgctctgc
tatgttatgccatcatccagtgcaagatgtgcccagtttcctcgtgcacaagataaagta
cattactatataaagctcaaagatttaagggatcagctgaaaggcgttgcaccaaacaca
gaggtgcaggaggtggagtacacatttgacttacagcttgcacaagaggatgctaaaaag
atggcagttaaggaagaaaaatatgatccaggatatgaagcagcatatggaggtgcttat
agtgatggaacagtccatgagagcgaacagtgcaacttctcttcagatggaactgcatca
agcaatccagagtacagtggaggttcatgctttggtgatgttcctaatggacagtggatg
acacagtcctttacagaccagattccagaattcaataacagcagggcacaagagctagaa
ggaagcagtgtataa
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