Gavialis gangeticus (Gharial): 109297851
Help
Entry
109297851 CDS
T07453
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn00280
Valine, leucine and isoleucine degradation
ggn00650
Butanoate metabolism
ggn00900
Terpenoid backbone biosynthesis
ggn01100
Metabolic pathways
ggn03320
PPAR signaling pathway
Module
ggn_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
109297851 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
109297851 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
109297851 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109297851 (HMGCS1)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
109297851 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
109297851
NCBI-ProteinID:
XP_019373446
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MRTASARAARRGAAMGFRSVSNSMPGSLPVNAEACWPKDVGIVALEIYFPSQYVDQAELE
KFDGVDGGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETI
IDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVA
GDIAVYATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVD
GKLSIQCYLSALDRCYSVYRNKIRAKWQKEGTDRGFTLNDFGFMIFHSPYCKLVQKSVAR
LLLNDFLSDQNPQTTNSIYNGLEAFRDVKLEDTYFDRDVERAFMKASSEIFNQKTKASLL
VSNQNGNMYTPSVYGCLTSLLAQFSPQQLAGQRIGVFSYGSGFAATLYSIRITQDATPGS
SLDKITASLSDLQTRLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVDDLFEGTWYLV
RVDEKHRRTYARRPLLGDGPLEAGIDVVHSGIVHEHIPSPAKKVPRIPAATEPEGVTVAI
SNGEH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacggcgtcggcccgcgcggctcggcgcggtgcggcgatgggattccgcagcgtt
tcaaacagcatgcctgggtctcttcctgtaaatgctgaagcctgttggccaaaagatgtt
ggaattgttgccctggagatctatttcccttctcagtatgttgaccaggcagaattggaa
aaatttgatggtgtggatggtgggaaatacaccatcggcttgggccagtcgaagatgggt
ttctgctctgatagagaggatatcaattctctctgcttgactgtggtgcagaagctcatg
gagaggaatagtctctcctatgactgcattgggcgattggaagttggaacagagacaatc
attgacaaatcaaaatctgtaaagactgttctgatgcaactctttgaagaatctggtaat
acagatgtagaagggatcgacacaacgaatgcatgctatggaggcactgctgctgtcttt
aatgctgttaactggattgagtccagttcttgggatgggcgctatgcacttgttgttgct
ggagacatagctgtatatgccactggaaatgctagaccaacaggtggagctggtgctgtt
gccatgctagttggtccaaatgctcctttaatatttgagagaggattgcgtgggacccat
atgcagcatgcctatgacttttacaaaccggatatggtgtctgaataccctgtagttgat
gggaaactgtctatacaatgctacctcagtgcattggatcgctgctattctgtttaccgc
aacaagatccgagctaagtggcaaaaggaaggaactgacagaggctttaccttgaatgac
tttggattcatgatcttccattcgccatactgtaaacttgtacagaaatctgtggcccgg
ctgctgttgaatgactttcttagtgaccagaatccacagacgacaaatagtatctataat
gggctggaagctttcagggatgtaaaactggaagatacatactttgacagagatgtagag
agagcctttatgaaagctagttctgagatctttaatcagaaaactaaagcttctctgctt
gtgtctaatcagaatggaaatatgtacaccccctcagtctatggttgcctcacttctctt
ctagctcagttctccccacagcagttagctggacagaggattggtgtgttctcctatggt
tctggatttgctgccaccttgtactctattagaattacacaggatgccacacctggttct
tctctggataaaataactgccagcctttctgatctgcaaacaagacttgactcacgaaaa
tgtattgcaccagatgtctttgctgaaaacatgaagattaggcaggaaactcatcacttg
gccaactatattccacagtgttcagtagatgatctctttgaggggacatggtacctagtg
cgagtggatgaaaaacaccgaagaacttatgcacggcgcccattgcttggtgatggccct
ttggaagcaggaattgatgttgtccattcaggaattgttcatgaacatatcccaagccct
gctaagaaagtgccaagaatccctgcagcaacagaacctgaaggtgttactgttgccatt
tccaatggagaacattaa
DBGET
integrated database retrieval system
