Gavialis gangeticus (Gharial): 109300359
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Entry
109300359 CDS
T07453
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109300359 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109300359 (TRPC5)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109300359 (TRPC5)
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109300359 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
109300359
NCBI-ProteinID:
XP_019376589
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSVEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCITIGLLFPVLSVVYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHVQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSIWYLCKWIHYRLCPGKDSEDEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDDANEDGAGEKAKAKSVSFSIANKKKDFNVSALIKTMSGIDIPVEKPKSNGINKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHLPEPNSEPMYTISDGVIQPHYMWQDIKYSQ
IDKEREENCSKSEINLNEVDYSGNMRHTGQSKECPVVCTSSLHCASSICSSNSKLIDSTE
DVFDSWGDACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaagtaaactattcgccctaccgagatcggatcccactg
cagattgtgcgggcagaggcagagctctccgtggaagagaaggcctacctcagtgctgta
gagaagggggactatgccagcgtgaaacatgccctccaagaggctgaaatctattacaac
atcaacatcaactgtatggatcctcttggacgcagtgcccttttaatagccatagagaat
gaaaacctggagatcatggagttgctgttgagccacagcgtgtacgttggggatgccctg
ctgtacgcaatacggaaggaggtggtgggggctgtggagctgcttctgaattacagaaaa
ccaagtggtgaaaaacaggtccctaccttgatgatggacacgcagttttcagaattcacc
ccggatatcaccccaatcatgctggcggctcataccaacaactacgaaatcatcaaactg
ctagtccaaaggcgggtaacgattccgcgccctcaccagatcaggtgcaactgtgtggag
tgtgtctccagctctgaggtagacagcctgaggcactcccggtcgaggctgaacatctac
aaagcattagccagcccttcgctgattgccttatcgagtgaggaccctatcttgacagcc
ttccggctgggctgggagttaaaggaactcagcaaggtggaaaatgagttcaaggcagaa
tatgaagagctctcccagcagtgcaagcgttttgctaaggatcttctggatcaggcgcgg
agttccagggagctagagatcattcttaaccacagggatgatcaaagcgaagagctggat
ccccaaaaatgtcatgatttggctaagctaaaggtagcaataaagtatcatcagaaagag
tttgttgctcagccaaactgccagcagttgctagctacgctgtggtatgacggctttcca
ggatggaggcggaaacactgggcagtgaaactcttgacctgcatcaccattggactgcta
tttccagtgctatctgtggtgtatttgattgcacctaagagtaggctgggactgttcatt
aaaaagccatttataaagtttatctgccacaccggttcttacttaaccttcctcttcatg
ctcctgctggcatcacagcacatcgtcaggacagatctccatgtgcagggaccaccgccc
accatcgttgagtggatgatcctaccctgggttctaggttttatttggggagaaatcaag
gagatgtgggacggtggattcaacgagtacatacatgactggtggaatctgatggatttt
gcaatgaactcactctaccttgcaactatctcccttaaaattgttgcctatgtcaagtat
aatggctcccgtccaagggaagaatgggaaatgtggcacccgacgctcattgcagaagcc
ctctttgcaatatccaatattttaagttccttgcgtctcatatccctgtttacagcaaat
tcccacctgggacccttgcagatctctctggggcgcatgctgctagacattctcaaattc
ctcttcatctactgcctggtgcttctggcttttgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcagaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacactttttgagaccctccagtcactcttctggtctgtgttc
ggtctgttgaatctctacgtcaccaatgtgaaagcccgccatgagttcaccgaatttgtt
ggggccaccatgtttggaacctacaatgttatctccctggttgtgctgttgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccatgcagatattgagtggaag
tttgcacggaccaagctctggatgagttacttcgatgaaggggccacactgcccccacct
ttcaacattatcccaagtcccaagtcaatctggtacctttgcaagtggattcattatcga
ctgtgtcctggcaaggactctgaggatgaacagaagaggcatgaaaacctaaaaacattt
acagaacggcatgctgacaacctgatccagaatcaacattaccaggaagtgatcagaaat
ctagtaaaaagatatgttgcagcaatgataagaaattccaaaaccaatgaggggttaact
gaagaaaattttaaggaattaaagcaggacatctctagctttcgctatgaagttcttgac
ctcctgggaaacaggaaaccccagaggaggagttactccaccagcagcacagaggtctcc
caaaaggatgacgcaaatgaagatggtgctggagaaaaagccaaagccaagagtgtgtct
ttcagcatagccaacaaaaaaaaagactttaatgtgtcagcgctcattaaaactatgtct
gggattgacattccagttgagaagccaaaaagcaatggaataaataagcgctccttcgtc
cgaaatgggaatagagttcaaaggctttcaagctccaagaaagagtccttcaagagactg
ggcctcctgttctccaagatgaatggacatctccccgagccaaattcagagcctatgtac
actatttcagacggagttattcagccacattacatgtggcaagacattaaatattctcag
attgataaagagagagaagagaactgttccaaaagtgaaattaacctcaatgaggtggac
tatagtgggaacatgagacatacaggacagagcaaggaatgccctgtggtctgtaccagc
tcccttcactgtgcttccagtatttgctcctctaactccaaacttatagactcaacagag
gacgtgtttgactcatggggagatgcttgtgacttgtttataaaccaatggaaagatggg
caggaagatcatgttacaactcggttataa
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