Gavialis gangeticus (Gharial): 109301431
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Entry
109301431 CDS
T07453
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109301431 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109301431 (GLI2)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109301431 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
109301431
NCBI-ProteinID:
XP_019378149
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MSKMETSASTAAGKKEGKGAILEGNSFTETGKKPAPLAAATAAAAAAAAAAAQGVPQHIF
PPFHAPLPIDMRHQEGRYHYEPHSIHAIHGPPALSGSPVISDISLIRLSPHPAGPGESPF
NPPHPYVSPHMEHYLRSVHSSPTLSMISAARGLSPADVAHEHLKERGLFGLPPPPPGANP
AEYYHQMTLMASHPNPYGDLLMQSGGAAGAAHLHDYLSPVDVSRFSSPRVTPRLSRKRAL
SISPLSDASIDLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGAISPAFSFPHPINP
VTYQQILSQQRGLSSAFGHTPPLIQPSPTFPPRQHVAVLSVNPPPTQISNNNSCIPDSNQ
SKQSSESAVSSTVNPVINKRSKVKTEVEGLPPASPTSQEHLTDLKEDLDKDECKQEPEVI
YETNCHWEGCTKEYDTQEQLVHHINNDHIHGEKKEFVCRWQDCTREQKPFKAQYMLVVHM
RRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQ
NRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHPRPPPLKENG
DNEASAKQSSKISEDGSEANGTARGMEDCLQVKTIKTENSVMCQSSPGGQSSCSSEPSPL
GSTNNNDSGVEMNMHSGGSLGDLTALDDNAPVVDSTVSSGNSTVSLQLRKHMTTMQRLEQ
LKKEKLKTVKDSCSWVTPAPQARNTKLPPISGNGSLLENNGGSSTTLPNPRIMELSVNEV
TTLNQLNERRDSATSTISSAYTVSRRSSGISPYFSSRRSSEASQLGNRPNNTSSADSYDP
ISTDASRRSSEVSQCSGMPGLLNLTPAQQYRLKAKYAAATGGPPPTPLPNMERMTLKNKI
SLLDGPEPGLPSFRLPPGPRRCSDGSTYGYTAATAFPHEVPGNTTRRASDPVRRPVAELP
SLPRVHRFNSTNSMNPLPPPHPVDRRNFGLQSYMRADGNLPRHVYSPRPLSISENIAMEA
MSGETDGPVGEDDIMLPDDVVQYIKSQNNGTAVESTSMGYGNEMQNFQGNGKLQPQSLPG
QRRMAVADAGLSHLGPMMADCQLSFDVSSNMSKNNMPVQWNEVSSGTVDVMSNQAKQPFS
QGNLAVVQQKQNFGQYQNFNQQQMQMSQSGMNVTQQNFLQRNVSLDGQRLNCMQMRQQQI
NPGMNMNPDLSPHPGYNQPHQMLSPNAIGGDPNQLSPSCSNMAVKPGPHIHPQQMDMATD
PSLMLNSNGERVMLNQVMHEQNQQSYSSQTNHLNFAMSQEVFHQPASLMTSNQPNFEPQQ
SMMGSTGQAYTPGMVQPHPPPEPSPANRHRGLRTMQQLGYMRTAHPPNDMSPGQETTPKR
TSDMMPTQPLQCAGGARETNLMYYYGQIHMYEQNGNFDNSVADCRVRQQQCAMSSKPAAM
PSPGANQVSSTVDSQGLEPPQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSSRLTTPR
NSLTLPSIPAGISNMAIGDMSSMLTTLAEESKFLNMMS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagatggaaacttctgcttcaactgctgctgggaaaaaggaagggaaaggtgca
attctggaggggaatagctttacagagacggggaagaaacctgctcccttagcagcggcg
acggcggcagcggcggcggcagcggcggcggcggcacaaggagtgccacagcacattttt
ccgcccttccatgctcctttgccaattgacatgcgccaccaggaaggaagataccattat
gaacctcactccatccatgctattcacgggcctcctgccctgagtggcagccccgttatc
tccgacatctccctcattcgcctttctcctcacccggcaggacccggtgagtcgccgttc
aacccccctcacccctacgtgagcccccacatggaacactacctccgctccgtgcacagc
agcccgaccctctccatgatctccgctgcccggggcctcagccccgcggacgtggctcac
gagcatctgaaagagagaggcctgtttggcttgcccccacctcctccaggagccaaccca
gctgagtactatcaccagatgacgctcatggccagccatccgaacccttacggggacctc
ctgatgcagagcgggggagcggccggcgcggcacatcttcacgattacctcagccctgtc
gacgtgtcaagattttcaagccctcgggtgactccaagattaagcagaaagcgagccctc
tccatatccccgctgtctgatgccagcattgatcttcaaacaatgatcaggacatcccct
aactccctggtggcttatattaataactcccgaagtagttctgctgcgagtggctcgtat
ggccatttatctgcaggggcaataagcccggcattcagcttcccccatcccatcaacccc
gtgacgtaccagcagatcctgagtcagcagaggggcttgagttcagcctttggacatact
cctcctttgatccagccatcccccaccttccccccacggcagcacgtggctgtgctctct
gtcaacccacctcctacgcagatcagtaacaacaacagctgcatccctgactccaatcag
agcaagcagagcagtgagtcagctgtgagcagcacggtcaatccagtaattaacaagcgc
agcaaagtcaagactgaagttgaagggttgcctccagcttccccaacctctcaggagcat
ctgacagacctgaaagaagatctggataaggatgaatgtaaacaggagcccgaagttatt
tatgagacaaactgtcactgggaaggatgcacaaaggaatatgacactcaggagcagctc
gtccatcacatcaataatgatcacatccacggagagaagaaggagtttgtttgccgctgg
caggactgcacccgggagcagaagccgttcaaggctcagtacatgttggtggtgcacatg
cgacgtcacacaggggagaaaccccacaagtgcacgtttgagggttgctccaaggcctat
tcccggctggagaacttaaagacacacctgagatctcacactggagaaaagccctatgtc
tgtgaacacgagggttgcaataaagccttttccaatgcttcagacagagctaagcaccag
aacaggacgcactccaatgagaaaccctatgtctgcaagatcccagggtgcacaaagagg
tacacagaccccagttccctcaggaaacacgttaaaactgtccacgggcccgatgcccac
gtcacgaagaagcaacgcaatgacgttcacccaaggcccccgccgctcaaggaaaacggc
gataacgaagccagtgccaagcagagcagcaagatctcagaagacggctctgaagccaac
ggtaccgccaggggcatggaggactgcttgcaagtcaagacgataaagacggagaattct
gtgatgtgtcagtccagtcctggtggccagtcgtcgtgcagcagtgaaccatcaccgctt
ggcagcaccaacaacaatgacagtggagtagaaatgaatatgcacagtgggggaagtctg
ggagatctgactgcgctggatgacaacgctcctgttgtggactcaacagtctcatctggt
aattcgacggtcagccttcagctgcggaaacacatgacaacgatgcaacggctcgaacag
ctcaagaaagagaaactcaagacagttaaggactcctgctcatgggtgaccccagctcca
caagccagaaacaccaagctgcctcccatatcaggaaacggctccttacttgaaaacaat
ggtggctcctctactaccctgccgaatcccagaataatggagctgtccgtcaatgaggtt
acgacactgaatcaattaaacgaacggcgagacagcgccacgagcaccatcagctccgcc
tacacggtcagccgccggtcatcggggatatccccttacttctccagccgccgctccagc
gaagcgtcgcagctcgggaatcgccccaacaacaccagctccgccgactcctacgacccg
atttccaccgatgcctcgcgcagatcgagtgaggtcagccagtgtagcgggatgccaggc
ctgctcaacctcacaccggctcagcagtacaggctgaaagccaagtacgcggctgccacc
ggcggccctcctcccactcctctgcccaacatggaaagaatgaccctgaagaataagatc
tctcttcttgatgggccggagccaggtttgccttcgtttcgcctccctcctgggccgagg
cgctgcagcgatggcagcacttacgggtacacggccgccacggcttttcctcacgaggtc
ccgggcaacaccacgagacgtgcgagcgatcctgtcagaaggccggttgcagaactgccg
tccctccccagagtccatcgcttcaacagcaccaacagcatgaatcctctcccccctcca
catcctgtggacagaaggaatttcggccttcagagctacatgcgcgccgatgggaacctt
cccaggcacgtctattcgcctcgacctctaagcattagtgaaaatattgccatggaagca
atgtctggcgagacagatggccccgttggagaggatgacattatgctgccagatgatgta
gtgcaatatatcaaatctcagaacaatgggacagctgtggaaagcacttccatggggtac
ggtaatgagatgcaaaacttccaaggcaatggcaaactacaaccccagagcttgcccggc
caacgcaggatggctgtagctgatgcaggcctgagccatttgggtccgatgatggcagat
tgccaactgagctttgacgtgtcctcaaacatgagtaaaaacaatatgcccgtccagtgg
aatgaggttagctcgggaacggttgatgttatgtctaaccaagcaaagcaaccgttttcc
caaggcaacttagccgttgtccaacagaagcagaactttggccagtatcaaaacttcaac
cagcagcaaatgcagatgagtcagagtggcatgaatgtaacccagcaaaacttcttgcaa
agaaatgtgagcctagatgggcaaaggctaaattgcatgcagatgaggcaacagcaaatc
aatcccggcatgaacatgaacccggatttgagcccacacccagggtataaccagcctcat
caaatgttgagcccaaatgcaatcggtggagatccaaaccaactttctccttcttgtagc
aacatggcagtgaagcctggaccccacattcatcctcagcaaatggacatggcgactgat
ccctccttaatgctcaacagtaacggtgaacgcgtgatgctgaatcaggtcatgcatgaa
caaaatcagcagagctattcatctcagacaaatcacctgaactttgccatgagtcaggag
gtgttccatcagcccgcttctttaatgacctcaaaccagccaaactttgagccccaacag
agcatgatgggttcaaccggacaggcctacactcccgggatggtacagcctcacccgccg
cctgaaccgagtccagcaaacagacatcgaggactgcgcaccatgcagcagctaggctac
atgaggactgcccaccctcctaacgacatgagccccggccaggaaaccactccaaaaaga
accagcgacatgatgccgacgcagcctctgcaatgtgcaggcggcgcaagggagaccaat
ttgatgtactattacggtcagatccacatgtacgagcaaaacggtaacttcgataactct
gtcgcggactgccgagtccgacagcagcagtgtgccatgagcagcaagccggctgctatg
ccttctcccggagctaatcaggtgtccagcacggtggactcgcaaggtctggagcctccc
cagatagattttgatgccatcatggatgatggagaccactcgagcctgatgtcaggaacc
ctgagccctagcattctgcagaacctctcccagaactcctctcgtctaacgactccacga
aactctctgacgctgccgtccatcccagcgggaataagcaatatggcaataggcgacatg
agctccatgttaaccaccctggcggaagagagtaaatttctgaacatgatgtcttaa
DBGET
integrated database retrieval system
