Gavialis gangeticus (Gharial): 109302075
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Entry
109302075 CDS
T07453
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109302075 (SCN4A)
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109302075 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
109302075
NCBI-ProteinID:
XP_019379121
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MASPPYLPGPDNLRLFTRESLAAIEQRIAEEEALKLKRQHVEVLDEEERKASSDLEAGKS
LPLIYGDPPPELIGVPLEDLDPFYRDQKTFIVLNKGKSIFRFSATPAVYMLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMNDPPPWSKNVEYTFTGIYTFESMIKILARGFCI
DSFTFLRDPWNWLDFSVIVMAYTTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
MQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPPFNETMQEDIFGMDNDTF
VNATLYGNLTGSGNNTFDYDAYMNDEGNFYFLEGALDALLCGNSSDAGKCPEGYECMKAG
RNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVLIIFLGSFYLI
NLILAVVAMAYAEQNDATALEIQQKEEEYQKLLEQLKKHQEEQAKMLKDRKLSACSATQK
KKGDSDQEADSDQDKLKDCNGRVVPKVVLERSATVRECNPTDDQDKLDYNHLTAGPQDGP
SLQKKAESVTSIISSTMEELEEARRTCPPWWYKFAKIFLVWDCCLPWLKLKAFVKLIVLD
PFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYDY
FQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISSDCTLPRWHMHDFFHAFLIVFRI
LCGEWIETMWDCMEVAGQAMCLIVFMLVMVIGNLVVLNLFLALLLSSFSADSLAASDDDG
EMNNLQIAIGRITRGIDFVKKTILMLLHRQWKEKKDPDEEQEESKTDNYVLNHMDSGQDS
KSDFMDGVAGKEHIDISVDKVDHMNFINNPNLTVQVPIASEESDLYEDETSTQSDTEDTK
KPLSHGSTSSMGSTVDYKPPVVEVEEVVEEAAEGTEPENCFTEACVQRFPFLYVDITTDK
GKIWWNLRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFS
FVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTT
TDELFDIEVVNNKSDCLALLDTNQVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAA
VDSREIEEQPLYETNIYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPQNQIQGVVYDFVTKQVFDITIMVLICLNMVTMMVE
TDDQSEAKIEILQTVNLIFIIIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSIVGLVL
SDVISKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDC
DPHLENPGSSVKGNCGNPSMGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLC
EDDFEMFYETWEKFDPDATQFITYSTLSDFVDTLQEPLKIAKPNKIKLVTMDLPMVPGDK
IHCLDILFALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIK
IQRAFRRYLLKRSVKQASYLYRHSKEVDTLLEEAPEKEGLIASKMNWNYGTGEVETAPTL
SLKPVLSSETPGAPSEAKKLDEKRNVKESFV
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccgccatacttaccaggtccagacaacctccgcctttttacccgtgaatct
cttgctgcaatagaacagcggattgctgaggaggaagcgctcaagttaaagcggcagcat
gtggaagtgctggatgaagaagaacgaaaggccagtagtgatctggaagctggaaagagc
cttccacttatttatggggacccacctccagaactcatcggggtgcctctagaagaccta
gaccctttctacagagatcaaaagacattcatagtcctaaacaaagggaaatcaatcttc
cgattctcagcaacccctgctgtctacatgctgggacccttcaaccccatcagaagaggt
gccatcaaagtgcttatacattcattattcagtatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacgatgaacgaccccccgccgtggtccaagaatgtggaatacacc
ttcactggaatatatacctttgagtccatgataaagatcctagcaagagggttttgcatt
gacagttttacattcctgcgagatccgtggaactggctggatttcagtgtcattgttatg
gcttataccacagagtttgtggatttgggaaatatctctgctttaagaacgttccgtgtc
ctccgtgcactgaaaacaattacggtaattccaggactgaagaccattgttggagccttg
atgcagtccgtgaagaagctctccgatgtcatgatactcacagtcttctgtctcagcgtg
tttgcacttattggtcttcagttgttcatggggaaccttcggcacaaatgtgtcaggtgg
ccaccccctttcaatgagactatgcaagaagacatctttggaatggacaatgacaccttt
gtgaatgcaacactctatggcaacctgactggatctggtaacaataccttcgattatgat
gcttatatgaatgatgaagggaatttctacttcctggagggagcgcttgatgccctgctc
tgtgggaatagcagcgatgctgggaagtgccctgaaggctatgaatgtatgaaagcagga
aggaacccaaactacggctacactagttatgacacatttagttgggctttccttgctctc
ttccgcctcatgactcaggattactgggagaacctcttccagctgactctacgtgcagct
gggaaaacttacatgatcttctttgttctgattatattcctcggttccttctacctcatc
aacctgatcctggctgtggtagccatggcatatgcagagcaaaatgatgctactgcactg
gaaatacagcagaaggaggaggagtatcagaagctcctggaacagctgaaaaagcatcag
gaggaacaagcaaaaatgttaaaagaccgtaagttaagtgcttgctctgcgactcagaaa
aagaagggcgactcggaccaagaagcggacagcgaccaagacaaactgaaagactgcaat
ggcagagttgtccccaaggttgtactggagcgatctgctacagtaagggaatgcaatccc
accgatgaccaagataaattggattataaccacctgacagcaggcccacaagatgggccc
agccttcagaagaaagcagagagtgttaccagtattatctctagcaccatggaagagtta
gaggaagctcgcaggacgtgcccaccctggtggtataaatttgccaaaattttccttgtc
tgggactgctgtcttccgtggctgaaactgaaggcgtttgttaagctgatagtgctggac
ccttttgtcgacctggggatcaccatctgcatagtgctcaacacactgttcatggccatg
gaacactatccgatgactgaagagtttgagaatgtgctgactgtggggaacctggtcttt
actgggatcttcactgctgagatggttttaaagctcatagctttggacccatatgactac
ttccagcaagggtggaacatatttgacagtatcatcgtcaccctgagcttggtggagctg
ggcctggctaacgtgcaggggctctctgtgctccgatctttccgtctgctcagagttttc
aagcttgccaagtcctggccaaccctcaacatgctcataaagatcataggcaactcagtg
ggcgctctcgggaacctcacccttgtgctggccatcattgtcttcatctttgctgttgtg
ggcatgcagctgtttgggaagagctacaaggagtgtgtgtgcaagatctcctctgactgc
acactgccccgctggcacatgcatgacttcttccacgccttcctcattgtcttccgcatc
ctgtgcggagagtggattgagaccatgtgggactgcatggaggtggcaggccaagccatg
tgccttatcgtcttcatgttggtgatggtcattgggaacctcgtggtcctgaacctgttc
ttagctttgctgctgagttccttcagtgctgatagccttgcagcttctgatgatgatgga
gagatgaacaatttgcagattgctattggcaggatcaccagggggattgactttgtaaag
aaaactatcctaatgctacttcacaggcagtggaaggagaagaaagacccagatgaggag
caagaggagagtaagacagacaactatgtcctaaaccatatggactctggccaggattcc
aagtcggattttatggatggagtagctgggaaagagcatatagatatctctgtggataag
gtggatcacatgaatttcattaataaccccaacctgactgtccaagtgccaattgcctca
gaggaatctgacctctacgaggatgaaacaagcacccagtctgacacagaagacaccaag
aagccgctgtcccacgggagcacatcgtccatgggtagcaccgtagattacaagccacca
gtagttgaggtggaggaggttgtggaggaggctgcagagggcaccgagcctgaaaactgc
ttcaccgaggcttgtgtgcagaggtttcccttcctttatgtcgacatcacaactgacaaa
gggaaaatatggtggaaccttcggaaaacctgcttcaagatcgttgaacacaactggttt
gagaccttcatcatctttatgatcctcctcagcagcggagcactggcttttgaagacatc
tatatcgagcagcgcaaagtcatacgtaccatcctggaatatgctgacaaggtcttctcc
tttgtcttcgtcattgagatgctgctcaagtgggtggcctatggcttcaaagtgtatttc
accaatgcctggtgctggctggattttctcattgttgatgtttccattatcagcttgaca
gcaaactggttgggatactcagaactgggagccatcaagtcactgaggactctgagagct
ttgagacctttgcgagctctgtccagatttgaaggcatgagggtagtagtaaatgccctg
ctgggagccatcccctccattatgaatgtcttgctggtctgtctgatcttctggctgata
ttcagcatcatgggtgtgaacctgtttgcagggaagtactaccggtgcatcaacaccacc
acagacgagctctttgatatcgaagtggtgaataataaaagtgactgcttggccctcctt
gataccaaccaggtccgatgggtgaatgtcaaggtcaactttgacaatgttgggttaggc
tacctctccctgctgcaggtggccacctttaaaggctggatggacatcatgtatgcagcg
gtggactcccgtgagattgaagagcagccactgtatgagaccaacatctacatgtacatc
tacttcgtcatcttcatcatctttggtgccttcttcactctcaacctcttcattggggtc
atcattgataactttaatcagcaaaagaaaaagtttggaggaaaggacatcttcatgaca
gaagagcagaagaaatactataatgccatgaaaaagctgggatcaaagaaaccccagaag
ccaatccccaggccccagaaccaaattcaaggcgtggtgtatgactttgtaacaaagcaa
gtgtttgacataactatcatggtcctgatttgtcttaacatggtgaccatgatggttgaa
acagatgaccaaagtgaagccaaaatcgaaattctccagactgtcaacctgattttcatc
atcatcttcactggcgagtgtgtgctcaaaatgtttgccctgcgctactattacttcacc
attggctggaacatctttgactttgtggtagtcattctctccattgtaggtctcgtcctt
tcagatgtcatttcgaaatattttgtgtcacccaccctctttagggtgattcggctggcc
aggattgggcgtgttcttcgtctaatcagaggagcaaaaggaatccggactctgctcttt
gccctcatgatgtccctaccagctttgttcaacattggacttctgctcttcctggtgatg
tttatctactctatctttgggatgtccaactttgcctatgtgaagaaggagtctgggatt
gatgacatcttcaacttcgaaacttttggtaacagcatcatttgtttgttccaaatcact
acatcagcaggatgggatggcctcctcaaccctatcctgaacagcggccctccagactgt
gacccccatttggagaaccctggcagttcagtgaaaggaaactgtgggaatccatctatg
ggcatctgctttttctgtagctatatcataatttctttcctgattgtcgtgaacatgtat
attgccatcattcttgagaacttcaatgttgctacagaggagagcagtgaacccctttgt
gaagatgactttgagatgttttatgaaacatgggagaaatttgatccagatgccacccag
tttatcacgtacagcaccttatctgactttgtcgacaccttacaagagccacttaaaatt
gccaagccaaacaaaattaaattggtcaccatggatttaccaatggtccccggggacaaa
atccactgtttggatattctgtttgctctgacaaaagaagtcttgggtgactcaggagaa
atggatgctttgaaagaaacaatggaggagaaatttatggctgcaaatccatccaaggtt
tcctatgaacccatcactacaactttgaaaagaaaacatgaagaagtatgtgccataaaa
atccaaagagccttccgcaggtaccttctaaagcggtctgtgaaacaagcctcctacctg
tacaggcatagtaaagaggtggacaccctattggaagaagcaccagagaaagaaggactg
attgcaagcaaaatgaactggaattatgggacaggagaagtagaaacagctccaaccctg
tctcttaaaccagttctaagctcagagactccgggtgctcccagtgaagcaaaaaaattg
gatgagaaacgtaatgtgaaagaatcatttgtataa
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integrated database retrieval system
