KEGG T02442: 101141012

Gorilla gorilla gorilla (western lowland gorilla): 101141012

Entry

101141012         CDS       T02442

Symbol

EFTUD2

Name

(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component

K12852

116 kDa U5 small nuclear ribonucleoprotein component

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Pathway

ggo03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:ggo00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101141012 (EFTUD2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ggo03041]
    101141012 (EFTUD2)
Spliceosome [BR:ggo03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101141012 (EFTUD2)
Complex C
   U5 SnRNP specific factors
    101141012 (EFTUD2)

SSDB

Motif

Pfam:

GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III EFL1 EF-G_D2

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

4:join(47368024..47368128,47375785..47375950,47377202..47377280,47378812..47378887,47379378..47379443,47380815..47380850,47381889..47381979,47382868..47382950,47386709..47386875,47390251..47390375,47394479..47394542,47394938..47395028,47397799..47397934,47399064..47399191,47399940..47400133,47402306..47402417,47402801..47402941,47403659..47403760,47405686..47405768,47407832..47407918,47408154..47408280,47408480..47408567,47409194..47409312,47409439..47409533,47410268..47410421,47411008..47411115,47411458..47411553)

AA seq 972 aa
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM

NT seq 2919 nt +upstreamnt +downstreamnt
atggataccgacttatatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggtagagagaccaaagatcttgatgagatggatgatgatgac
gacgacgatgacataggagatcatgacgatgaccaccccgggatggaggtggtgctgcat
gaggacaagaagtactacccaacagccgaggaggtgtatggtcctgaggtggagaccata
gttcaagaggaagacactcagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgttacagtgtatgagatggatttcttggcg
gatctgatggataactcagagctcatcagaaatgtgaccctttgtggacatctccaccat
ggcaagacatgttttgtggattgtttaattgaacagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgtaggc
atcaaaagcactcctgtgacagtggtcttgccagacaccaaaggaaaatcttatctcttc
aatatcatggacactccaggacatgtgaatttctctgatgaggtcacagctggcttgcgc
atctcagatggagtggtccttttcattgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcatgcggtgcaggagaggctggcagtcactgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgcctccaactgatgcgtattacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctt
tccccactcctgggtaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctacgccgacacctttggtgacattaattaccaagaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcaccaaaaaggcc
ccaactagcagctcccagagaagtttcgtggagtttatcttggagcccctttataagatc
ctcgcccaggttgtaggtgacgtggacaccagccttccacggaccctagacgagcttggc
atccacctgacgaaggaggagctgaagctgaacatccgccccttgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccttct
ccaaaggtgggcgccaagcccaagattgagcacacctacaccggtggtgtggactccgac
ctcggcgaggctatgagtgactgtgaccctgatggccccctgatgtgccacactactaag
atgtacagcacagatgatggagtccagtttcacgcctttggccgggtgctgagtggcacc
attcatgctgggcagcctgtgaaggtactgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcaaccataaccgaaccccgaggcaatgaggaggctcagattttccgacccttg
aagttcaataccacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgcttgatggcctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaggagtctggcgagcatgtgatcctgggcaccggggagctctacctggactgtgtg
atgcatgatttgcggaagatgtactcagagatagacatcaaggtggctgacccagttgtc
acgttttgtgagacggtggtggaaacatcctccctcaagtgctttgctgaaacgcctaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctggcagaggacata
gaaaatgaggtggtccagattacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgattgggatctgctggctgcccgttccatctgggcttttggccctgatgcgacc
ggccccaacattctggtggatgatactctgccctctgaggtggacaaggctcttcttggt
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggagggccccctctgt
gatgaattgattcggaatgtcaagtttaagatcctggatgcggtggttgcccaggagccc
ctgcaccggggcgggggccagatcatccccacagccaggagagtcgtctactctgccttc
ctcatggctactcctcgtctgatggagccttactactttgtagaggtccaggcccctgca
gattgtgtctctgcagtttataccgtcctggccaggcgcagggggcacgtgactcaggat
gcacccatcccaggctcccctctgtacaccatcaaagcttttatcccggccatcgactct
tttggctttgagactgatctccggactcacacccagggacaagccttttctctgtctgtc
ttccaccactggcagattgtgcctggtgatcccctggacaagagcattgtcatccgcccc
ttggagccacagccagctcctcacctggcccgggaattcatgatcaaaacccgccgtagg
aagggcctcagtgaagatgtgagcatcagcaaattcttcgatgatcctatgttgctggaa
cttgccaaacaggatgttgtgctcaattaccccatgtga

DBGET integrated database retrieval system