Gorilla gorilla gorilla (western lowland gorilla): 101145520
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Entry
101145520 CDS
T02442
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101145520 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggo03400
]
101145520 (LIG4)
Enzymes [BR:
ggo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101145520 (LIG4)
DNA repair and recombination proteins [BR:
ggo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101145520 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
101145520
NCBI-ProteinID:
XP_030857246
Ensembl:
ENSGGOG00000027771
LinkDB
All DBs
Position
14:complement(join(122936162..122938845,122942157..122942244))
Genome browser
AA seq
923 aa
AA seq
DB search
MATPQETIKISFYSWDSLVHRGNGACPRPDLCSTLERIQKSRGRAEKIRHFREFLDSWRK
FHDALHKNHKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALK
LLNYRTPTGTHGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIK
KSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQL
HDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVY
KYFSRNGYNYTDQFGASPTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTK
FDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQA
HTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVG
GYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKP
FHRKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDK
EWHECMTLDDLEQLRGKASGKLASKHLYIGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPN
LTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSKNIR
VKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFID
TDLNQLKEVFSGIKNCNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDSYAVIND
LSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI
LKESWVTDSIDKCELQEENQYLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgcaggaaaccatcaagatctcattttacagctgggattctctggttcac
agaggtaacggagcttgcccgaggccagatttgtgttcaactttagaacgaatacagaaa
agtagaggacgtgcagaaaaaatcagacacttcagggaatttttagattcttggagaaaa
tttcatgatgctcttcataagaaccacaaagatgtcacagactctttttatccagcaatg
agactaattcttcctcagctagaaagagagagaatggcctatggaattaaagaaactatg
cttgctaagctttatattgagttgcttaatttacctagagacgggaaagatgccctcaaa
ctcttaaactacagaacacccactggaactcatggagatgctggagactttgcaatgatt
gcgtattttgtgttgaagccaagatgtttacagaaaggaagtttaaccatacagcaagta
aacgaccttttagactcaattgccagcaataattctgctaaaagaaaagacctaataaaa
aagagccttcttcaacttataactcagagttcagcacttgagcaaaagtggcttatacgg
atgatcataaaggatttaaagcttggtgttagtcagcaaactatcttttctgtttttcat
aatgatgctgctgagttgcataatgtcactacagatctggaaaaagtctgtaggcaactg
catgatccttctgtaggactcagtgatatttctatcactttattttctgcctttaaacca
atgctagctgctattgcagatattgagcacattgagaaggatatgaaacatcagagtttc
tacatagaaaccaagctagatggcgaacgtatgcaaatgcacaaagatggagatgtatat
aaatacttctctcgaaatggatataactacactgatcagtttggtgcttctcctactgaa
ggttctcttaccccattcattcataatgcattcaaaacagatatacaaatctgtattctt
gatggtgagatgatggcctataatcctaatacacaaactttcatgcaaaagggaactaag
tttgatattaaaagaatggtagaggattctgatctgcaaacttgttattgtgtttttgat
gtattgatggttaataataaaaagctagggcatgagactctgagaaagaggtatgagatt
cttagtagtatttttacaccaattccaggtagaatagaaatagtgcagaaaacacaggct
catactaagaatgaagtaattgatgcattgaatgaagcaatagataaaagagaggaggga
attatggtaaaacaacctctatccatctacaagccagacaaaagaggtgaagggtggtta
aaaattaaaccagagtatgtcagtggactaatggatgaattggacattttaattgttgga
ggatattggggtaaaggatcacggggtggaatgatgtctcattttctgtgtgcagtagca
gagaagccccctcctggtgagaagccgtctgtgtttcatactctctctcgtgttggctct
ggctgcaccatgaaagaactgtatgatctgggtttgaaattggccaagtattggaagcct
tttcatagaaaagctccaccaagcagcattttatgtggaacagagaagccagaagtgtac
attgaaccttgtaattctgtcattgttcagattaaggcagcagagatcgtacccagtgat
atgtataaaactggctgcaccttgcgttttccacgaattgaaaagataagagatgacaag
gagtggcatgagtgcatgaccctggatgacctagaacaacttagggggaaggcatctggt
aagctcgcatctaaacacctttatataggtggtgatgatgaaccacaagaaaaaaagcgg
aaagctgccccaaagatgaagaaagttattggaattattgagcacttaaaagcacctaac
cttactaacgttaacaaaatttctaatatatttgaagatgtagagttttgtgttatgagt
ggaacagatagccagccaaagcctgacctggagaacagaattgcagaatttggtggttat
atagtgcaaaatccaggcccagacacgtactgtgtaattgcagggtctaagaacatcaga
gtgaaaaacataattttgtcaaataaacatgatgttgtcaagcctgcatggcttttagaa
tgttttaagaccaaaagctttgtgccatggcagcctcgctttatgattcatatgtgccca
tcaaccaaagaacattttgcccgtgaatatgattgctatggtgatagttatttcattgat
acagatttgaaccaactgaaggaagtattctcaggaattaaaaattgtaacgagcagact
cctgaagaaatggcttctctgattgctgatttagaatatcggtattcctgggattgctct
cctctcagtatgtttcgacgccacaccgtttatttggactcgtatgctgttattaatgac
ctgagtaccaaaaatgaggggacaaggttagctattaaagccttggagcttcggtttcat
ggagcaaaagtagtttcttgtttagctgagggagtgtctcatgtaatcattggggaagat
catagtcgtgttgcagattttaaagcttttagaagaacttttaagagaaagtttaaaatc
ctaaaagaaagttgggtaactgattcaatagacaagtgtgaattacaagaagaaaaccag
tatttgatttaa
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