Gemmatimonas groenlandica: HKW67_12405
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Entry
HKW67_12405 CDS
T07783
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HKW67_12405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_12405 (nth)
Enzymes [BR:
ggr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HKW67_12405 (nth)
DNA repair and recombination proteins [BR:
ggr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HKW67_12405 (nth)
Prokaryotic type
HKW67_12405 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QJR38213
UniProt:
A0A6M4ITZ4
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All DBs
Position
2942655..2943359
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AA seq
234 aa
AA seq
DB search
MTKTHGQKPSQRAALVSRSPKTKADKLAIATVVLERLKAEYPDAHCELDYRNPFELLGAT
ILSAQCTDVRVNMVTPVLFARYPDAESLSVARQEDVEEIVRTTGFFRAKAKSLIGMATML
VERFGGEVPRTVTELVPLPGVGRKTANVVLGNAFGINEGIVVDTHVQRLARRLGLTREAD
PIGIEQALIPLFPRDDWALLSHLLIWHGRRRCFARKPDCGACVLAEVCPSCEVC
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagacgcacgggcagaagccgtcgcagcgcgcggcgctggtgtcccgatcgccg
aaaacaaaagccgacaagctggccatcgccacggtcgtgctggagcgcctgaaggcggag
tatcccgacgcccattgcgaactggactaccgcaatccgttcgagctgttgggcgctacg
attctctcggcgcagtgcaccgatgtgcgcgtgaacatggtcaccccggtgctgttcgcg
cgctatccggatgccgagtcgctgagtgtcgcgcggcaagaagacgtggaggagatcgtg
cgcaccacggggttcttccgcgcgaaagcgaagagtctgatcggtatggcgacgatgctc
gtggagcgattcggcggagaggtgccgcgtaccgttaccgagctggtgccgctgccgggt
gttggacggaagacagcgaatgtcgtgctgggcaatgcattcgggatcaacgaaggcatc
gtcgtggacacccacgtgcagcggttggcgcgacggctagggctcacgcgtgaagcagac
ccgatcgggatcgagcaggcgctaataccgctctttccacgcgacgattgggcgctgctg
agccacttgttgatctggcacggacgacggcgatgcttcgcgcggaagccggactgcggc
gcgtgcgttttggcagaggtttgtccgagctgcgaggtttgttga
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