Gemmatimonas groenlandica: HKW67_16685
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Entry
HKW67_16685 CDS
T07783
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr01501
beta-Lactam resistance
ggr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HKW67_16685
01503 Cationic antimicrobial peptide (CAMP) resistance
HKW67_16685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggr03036
]
HKW67_16685
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggr02000
]
HKW67_16685
01504 Antimicrobial resistance genes [BR:
ggr01504
]
HKW67_16685
Chromosome and associated proteins [BR:
ggr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HKW67_16685
Transporters [BR:
ggr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HKW67_16685
Antimicrobial resistance genes [BR:
ggr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HKW67_16685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_CusB
BSH_RND
Biotin_lipoyl
BSH_CzcB
Beta-barrel_YknX
HH_EMRA
Beta-barrel_AprE
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
QJR37036
UniProt:
A0A6M4IU68
LinkDB
All DBs
Position
3907774..3908982
Genome browser
AA seq
402 aa
AA seq
DB search
MPNPSTPTIMTKAINNPRTTHMLRPTMLLSAAMVPLLAACDSAPAAEQDAAARAPAVSVS
VATVTSATPANAVSATGTFGSRDEIPLAFKIGGVVSRVLIDEGATVQRGQLLASLDLREI
NAAVDKAQVGFDKAQRDQARVQRLAADSVATLAQLQDATSALEAARSDLVSAKVNREYAT
IVAPEGGIVLRSLVTAGSNVSAGTPILQLGGSRRGRVLRVGLPDRDALRVQLGDAATVHF
DALPSRTFTGRVQLVGRSADPRTGTYAVEITVNGADALPSGLVGAVSIAARASTDAATRG
ASISVDALLEADRDAATVYTVAAAREAPGELIAQPQRVRVMGVRGDRATIEGLAPDTRIV
TRGAPYVTPGARVRIVTADTLNAALKATASPATPVKRTAVLP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacccctccacccccacgatcatgacaaaagccatcaacaacccgcgcaccacg
cacatgcttcgccccaccatgctactgtcggcggccatggtgccactgttggcggcctgc
gatagcgctccggcagcagagcaggacgccgccgctcgtgcaccggcggtgtcggtgagc
gtcgccaccgtcacgagcgctacacccgccaacgcggtaagcgccacgggcaccttcggc
tcgcgcgatgaaattccgctggcgttcaagatcggcggagtggtatcgcgcgtcctgatc
gatgagggagcgacggtgcaacgcggccagttgctggcgtcgctcgacctgcgtgagatc
aatgcggccgtggacaaagcgcaggtgggtttcgacaaggcccagcgtgatcaggcccgg
gtgcagcggctggcggctgacagtgtggcaacgctcgcgcagctgcaagacgccacgtcg
gcgctcgaggccgcgcggtcggatctggtctcggccaaggtgaatcgcgagtacgccacc
atcgtggcgccggaaggaggcatcgtactgcggagcctcgtcacggccggctcgaacgtg
tcggcgggcaccccaatcctccagctcggcggctcgcgtcgcggtcgcgtgctgcgcgtg
gggctacccgatcgcgatgcgctgcgtgtgcaactgggagacgccgccacggtgcacttc
gatgccttgccatcgcgcaccttcaccggccgcgtgcagctggtgggtcgctcggctgac
ccacgcacgggcacctatgccgtcgagatcacggtgaacggtgccgacgcgctgcccagt
ggactcgtgggcgcggtttcgatcgccgctcgagcgtctacagacgctgccacgcgaggc
gcctcgatatcggtggacgcgttgctcgaagcggatcgcgatgcggccaccgtgtacacc
gtagcggctgcgcgtgaggcgccaggcgagttgattgcgcagccgcagcgcgtgcgcgtg
atgggcgtacgcggcgaccgcgccacgatcgaagggctcgcgcccgacacccgtatcgtg
acgcgcggcgcgccgtatgtcacgcccggagcgcgcgtgcgcatcgtcacggctgatacg
ctcaacgcggccttaaaggccacagcgtcaccggccacgccggtgaagcgcacggcggtg
ctgccatga
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