Gemmatimonas groenlandica: HKW67_19590
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Entry
HKW67_19590 CDS
T07783
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr01501
beta-Lactam resistance
ggr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HKW67_19590
01503 Cationic antimicrobial peptide (CAMP) resistance
HKW67_19590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggr03036
]
HKW67_19590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggr02000
]
HKW67_19590
01504 Antimicrobial resistance genes [BR:
ggr01504
]
HKW67_19590
Chromosome and associated proteins [BR:
ggr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HKW67_19590
Transporters [BR:
ggr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HKW67_19590
Antimicrobial resistance genes [BR:
ggr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HKW67_19590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
BSH_Fcp1
BSH_CusB
YknX_C
BSH_RND
Biotin_lipoyl
BSH_YknX
Beta-barrel_ALG44
HH_EMRA
RND-MFP_C
Beta-barrel_RND
CzcB_C
OEP
BSH_RND_rel
HH_CzcB
PTS_EIIA_1
HH_YBHG
DUF3967
Motif
Other DBs
NCBI-ProteinID:
QJR37562
UniProt:
A0A6M4IXD2
LinkDB
All DBs
Position
4571489..4572622
Genome browser
AA seq
377 aa
AA seq
DB search
MTRRTASLALLATALVGTACSKDKEASAANAAPVAQNIGPENIAVANTDTLRSGPAVSGS
LVADREARIRAELSGAVLQIFVEPGERVSSGTVLARIDDANVRDAALSARSAVAQATVGA
EQAARELQRAKTLVAAGAIAERDVEGATNANLGAQAQLADAKSRLASADKNLRNATIRAP
FAGVVAERAVSPGDVVSPGAALFTVIDPRSLKLEASVPTAALGTVRVGATVSFTVNGSDR
VLEGRITRVSPMVDAQTKQVKIFASVPNDRNELVSGLFVEGRVAAEKRVGVLVPEAAVDQ
TGISPMVMRLKNGKVEKVQVQLGLRDESAEKIEVRTGLAGGDTVLLGAARGISVGSSVVV
SSPKDATPRAASPVKNN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactcgccgaaccgcgtccctggctctcctcgcgacagcgctggtggggactgcctgc
agtaaagacaaggaagcgtcggccgccaacgcggcgccggtcgcccagaacatcggaccg
gaaaacatcgccgtggccaataccgacacgctgcgaagcggtccggcggtgtcgggttcg
ctggtggctgatcgtgaagcacgcattcgcgccgagctctccggcgccgtgctgcagatc
ttcgtcgagccaggcgagcgcgtgagctccggcaccgtgctcgcccgcatcgatgacgcc
aacgtgcgcgatgcggcgctgtcggcccgctccgcggtcgcacaggccaccgttggcgcc
gaacaggccgcccgtgaactgcagcgggcgaagacgctggtcgcggccggtgcgatcgcc
gagcgcgacgtcgaaggtgcgaccaacgccaatcttggcgcgcaggcgcaactggccgac
gcgaagtcgcgccttgcctcggccgacaagaacctgcgcaacgcgaccattcgggcaccg
ttcgcgggtgtcgtcgccgagcgcgccgtcagcccgggcgacgtggtgtcgccgggggcc
gcactgttcaccgtgatcgatccacgcagtctgaagctggaagcgtcggtgccgacggcg
gcgttgggcaccgtgcgggttggggcgaccgtctcgttcaccgtcaatggctcggatcgc
gtcctcgagggacgcatcacccgcgtgagcccgatggtcgatgcgcagactaagcaggtg
aagatctttgccagcgtgcccaacgaccgcaacgagctggtgtccgggctctttgtcgag
gggcgcgtcgcggcggagaagcgggtgggtgtgctagtgcccgaagccgccgtcgatcag
acgggtatctcgccgatggtgatgcgcctcaagaacggcaaggtcgagaaggtgcaggtc
cagttgggacttcgtgacgagagcgcggaaaagatcgaagtgcgcacggggctggccggt
ggggacaccgtgctcctcggtgccgcccgcggcatttcggtcgggtcgtccgtggtggtt
tcgtcgccgaaggatgccacgccgcgtgcggcgtcacctgtgaagaacaactga
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