Geoalkalibacter halelectricus: L9S41_06085
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Entry
L9S41_06085 CDS
T09882
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc00540
Lipopolysaccharide biosynthesis
ghc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
L9S41_06085 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ghc01005
]
L9S41_06085 (lpxC)
Enzymes [BR:
ghc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
L9S41_06085 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
ghc01005
]
Lipid A
L9S41_06085 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Thiolase_C_1
Methyltransf_21
Motif
Other DBs
NCBI-ProteinID:
UWZ80960
LinkDB
All DBs
Position
complement(1371427..1372356)
Genome browser
AA seq
309 aa
AA seq
DB search
MIFQSTIATPVIVSGIGLHSGRRITMNLRPAEAGTGILFHRSEGERQVTIEAVSANVIDT
RLATVLGKGGLSVSTVEHLLAALNALGIDNLHIDIDGPEVPVLDGSAAPFVDLLHSAGVR
QLERSRKFLAIRKPITLIEGEKRVTLIPSRFFRVSFDIAFDHPSITQQHYSFKCTAQSFR
KEIAAARTFGFLHEVEYLKANGLARGGSLDNAIVIGEDGILNPEGLRYADEFVRHKILDS
IGDFSLLGYPLLGHLKAYKAGHDINHKMVEKILAHPDHWKLVDFSEETVRQAGRGIFPAF
AGELLPTKA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgattttccaaagcaccatcgccaccccagtgatcgtttccggcatcggcctgcattcc
gggcgccgcatcaccatgaacttgcggcccgcggaagccggcacgggcatcctgtttcat
cgcagtgaaggcgagcgccaggtgaccatcgaggccgtttcggccaatgtcatcgacacc
cgtctcgcaactgttcttggcaaaggcgggttgagcgtttcgaccgttgaacacctcctt
gcggccttgaacgccctgggcatcgacaatctgcatatcgacatcgacggccctgaagta
ccggttctcgacggcagtgccgcaccctttgtcgacttattgcacagcgccggtgtgcgc
caactcgaacgcagccgcaaattcctggccatccgcaaaccgatcaccctgatcgaaggg
gaaaaacgtgtgacgcttatcccgtcgcgctttttccgggtgagtttcgatatcgccttc
gatcatccgagcatcactcagcaacattactccttcaaatgcaccgcccagagttttcgc
aaggaaattgccgcggcgcgcactttcggcttcctccacgaggtggaataccttaaggcc
aacggcctggcccgggggggctctctcgacaacgccatcgtcatcggcgaggacggcatc
ctcaacccagaaggcttgcgttatgccgatgaattcgttcgccacaagattctcgacagt
atcggcgacttcagcctactgggctatccgctcctcggtcacctcaaggcctacaaagca
gggcacgacatcaaccacaagatggttgaaaaaatccttgcccatcccgaccactggaaa
ttggtggatttcagcgaagaaaccgtacgtcaggcagggcgcggcattttcccggcattt
gccggtgaactcctgcccaccaaggcgtga
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