Gossypium hirsutum (upland cotton): 107898356
Help
Entry
107898356 CDS
T04793
Name
(RefSeq) probable terpene synthase 12
KO
K12742
isoprene synthase [EC:
4.2.3.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107898356
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.27 isoprene synthase
107898356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
107898356
NCBI-ProteinID:
XP_016679353
UniProt:
A0A1U8ISG1
LinkDB
All DBs
Position
D04:52473847..52478942
Genome browser
AA seq
605 aa
AA seq
DB search
MALAPPSLILCSPGLNPKQVMIPTNICRRKVECDHRSLMSSSRVFCAVPPPTTQVSNSDH
PKGGRSSANYQPTIWSYDFLQSLKNDHADIIYKERAAKLEQELRFALHDENAEPVNLLEL
IDGIQRLGLGHRFEIDINRALEKILTSDDYSVATKYSLHAAALRFRLLRQHGYVVSQDVF
KAFKDHKGNFKDCLYKDVKGMLSLYEASRLAFEGEYVMDEAFLFTRMHLMDLQGVSNLEE
GLLLEQVIHALELPLHRRMVRLEARWYIEAYSKSAARKTNLLELAKLDFNLVQSTLQEDL
KEMTRWWIGMGLSSKLNFARDRLMECFFWSVGMVSEPQFRNCRKSLTKVASFVTIIDDVY
DVYGTLDELELFTEAVQRWDVCAVKDLPKCMELCFLVLYNSVNEMAYETLRDHGENIIPY
LTKAWADLCNAFLKEAEWARTKHVPTFQDYLENAWVSVSGHIFLVHAYFLQSPNITSEAL
DSLEQYHDILRWPSTIFRLCNDLGTSKDELERGESANSIICYMKEVGCSEATARQHISDL
IDNYWMKMNKCQMEGSPFAKHLVETATNLARISQCTYQHGDAHGCPDNLSKNRVQSLIVD
PISIN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggcacctcccagcctcatcctctgcagtcccggtctgaatcctaagcaagta
atgatccctactaatatttgtcgtcgcaaagttgaatgtgatcatcgttcgttgatgagt
agctcccgtgttttctgtgctgtaccgccgcccaccactcaagtttctaattctgatcac
ccaaaaggtggaagaagttcagcaaattaccagccaactatttggagctacgatttcctt
cagtccttgaagaatgatcatgccgatatcatatacaaagagagagcagcgaagttagag
caggaactgaggtttgctcttcatgatgaaaacgcagagccagtgaacttgctagaactg
attgatggcatccaacggctggggttaggtcatcgttttgagattgatatcaatcgagcc
cttgagaaaattctaacatcagatgactatagtgtcgcaacaaagtatagtctgcatgca
gcggctctaagattcagactcctcaggcaacacggctatgtggtttctcaagatgtgttt
aaagctttcaaggaccataagggaaatttcaaggattgcctttacaaggatgtcaaagga
atgttgagtttgtatgaagcttcacgtcttgccttcgaaggagagtatgtaatggatgaa
gccttcttgtttacacgaatgcatctcatggatttacagggtgttagtaatctggaagaa
ggtttattattagaacaggtgatccacgcattggagctcccactgcatcgaagaatggtc
aggctagaagctcgatggtacatcgaagcttacagcaaaagtgcagctagaaaaacaaac
ctacttgaattggccaaactggattttaacttggtgcagtcaacacttcaagaagatctt
aaagagatgacaagatggtggattggtatggggctatcgagcaagttgaatttcgcaagg
gataggctcatggaatgcttcttttggtctgttggaatggtctctgaacctcaattcagg
aattgccgaaaaagtttaaccaaagtggcttctttcgttactataatcgatgatgtttac
gatgtttatggcactttagatgaattagagttgttcactgaagctgttcaaagatgggat
gtatgcgccgtaaaagatcttcccaagtgtatggagctatgctttcttgttctgtacaac
tctgtaaatgagatggcttatgaaactcttagagaccatggagaaaacatcattccatac
ttaaccaaagcttgggcagatctatgcaatgcattcttgaaagaagcagagtgggcacgt
actaaacatgttccaacattccaagactatcttgaaaatgcatgggtgtcagtgtctgga
catatttttctagtccatgcctattttttacagagtccaaacatcacaagtgaagcactt
gacagcttggaacagtaccatgatatccttcgttggccatctactattttccgactttgt
aatgatttgggtacttcgaaggatgagttggaaagaggtgaaagtgcaaactcgataata
tgctacatgaaggaagttggttgctcagaagcaacggctcgccaacatataagtgatttg
atcgataattattggatgaaaatgaataaatgccaaatggaaggttctccatttgcgaaa
catttggtagaaacagctactaatttggctcggatttcccaatgcacataccagcatgga
gatgcacatggatgtccagataatctatctaagaatcgagtacaatcgttgattgttgac
cctatttctataaattag
DBGET
integrated database retrieval system